RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 THAP11Q96EK4 314 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 EDC3Q96F86 508 aaKnown RBP10.86□□□□□ -0.67
USP53-207ENST00000510852 FHDC1Q9C0D6 1143 aaPredicted RBP10.86□□□□□ -0.67
USP53-207ENST00000510852 CDH19Q9H159 772 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 PLCB1Q9NQ66 1216 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 EXOC1Q9NV70 894 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 SIRPGQ9P1W8 387 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 CEP72Q9P209 647 aa10.86□□□□□ -0.67
USP53-207ENST00000510852 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
USP53-207ENST00000510852 USP17L3A6NCW0 530 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 USP17L4A6NCW7 530 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 DDIT3P35638 169 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP53-207ENST00000510852 FMR1Q06787 632 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP53-207ENST00000510852 RASGRF1Q13972 1273 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 C8orf34Q49A92 452 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 USP17L2Q6R6M4 530 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 BTN2A1Q7KYR7 527 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 USP17L1Q7RTZ2 530 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 FAM184AQ8NB25 1140 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 TMEM260Q9NX78 707 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 CACNA1SQ13698 1873 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 CCNCP24863 283 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 ZAP70P43403 619 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 PICALMQ13492 652 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 KIF22Q14807 665 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 TTLL5Q6EMB2 1281 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 SRLQ86TD4 932 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 DCLK2Q8N568 766 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 FAM200AQ8TCP9 573 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 MOGAT1Q96PD6 335 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 NACA2Q9H009 215 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 ALG13Q9NP73 1137 aaKnown RBP10.85□□□□□ -0.67
USP53-207ENST00000510852 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 PAG1Q9NWQ8 432 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 HMG20BQ9P0W2 317 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 C2CD2Q9Y426 696 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 LTBP1Q14766 1721 aa10.85□□□□□ -0.67
USP53-207ENST00000510852 DUOX1Q9NRD9 1551 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 SNED1Q8TER0 1413 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 MYO1BO43795 1136 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 TMCC2O75069 709 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 KRT10P13645 584 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 HSPA4P34932 840 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 MAPK8P45983 427 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 GTF2A2P52657 109 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 ISM2Q6H9L7 571 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 C16orf86Q6ZW13 317 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 ZNF804AQ7Z570 1209 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 SPATA5Q8NB90 893 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 USP6NLQ92738 828 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 RMDN2Q96LZ7 410 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 STRBPQ96SI9 672 aaKnown RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 TCHPQ9BT92 498 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 ATP8A2Q9NTI2 1148 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 BLOC1S4Q9NUP1 217 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 SQORQ9Y6N5 450 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 K7ENM7 598 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 MTRF1O75570 445 aaKnown RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 GALNSP34059 522 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 ETFBP38117 255 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 AP1ARQ63HQ0 302 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 ANKS3Q6ZW76 656 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 OTOP3Q7RTS5 596 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 TRIM22Q8IYM9 498 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 VPS52Q8N1B4 723 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 C1orf216Q8TAB5 229 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 DDX12PQ92771 950 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 EMID1Q96A84 441 aaPredicted RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 RBM18Q96H35 190 aaKnown RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 DHRS1Q96LJ7 313 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 EYA3Q99504 573 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 SMAD5Q99717 465 aaKnown RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 BAG1Q99933 345 aaPredicted RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 ZC3H12CQ9C0D7 883 aaKnown RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 ANTXR1Q9H6X2 564 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 ZNF304Q9HCX3 659 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 HERC5Q9UII4 1024 aaKnown RBP10.84□□□□□ -0.67
USP53-207ENST00000510852 BLOC1S6Q9UL45 172 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 BCS1LQ9Y276 419 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 AFG3L2Q9Y4W6 797 aa10.84□□□□□ -0.67
USP53-207ENST00000510852 VSTM5A8MXK1 200 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 GFPT2O94808 682 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 CAPN3P20807 821 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 NEK2P51955 445 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 PKN1Q16512 942 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 C21orf62-AS1Q17RA5 79 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 FILIP1LQ4L180 1135 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 TMEM151BQ8IW70 566 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 UBR7Q8N806 425 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 PJA1Q8NG27 643 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 TRPV5Q9NQA5 729 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 DNMT3AQ9Y6K1 912 aaPredicted RBP10.83□□□□□ -0.68
USP53-207ENST00000510852 F8VZ95 297 aa10.83□□□□□ -0.68
USP53-207ENST00000510852 FRAT2O75474 233 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 613.8 ms