RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	RAD50	Q92878	1312 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	GREB1L	Q9C091	1923 aa	Predicted RBP	12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	NKRF	O15226	690 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	MMP1	P03956	469 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	BMPR1A	P36894	532 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	CLCN5	P51795	746 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	CAMK1	Q14012	370 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	TKFC	Q3LXA3	575 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	UBALD2	Q8IYN6	164 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	KIAA2013	Q8IYS2	634 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	SDR42E1	Q8WUS8	393 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	KIFC2	Q96AC6	838 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	RPGRIP1	Q96KN7	1286 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	RNF146	Q9NTX7	359 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	CYP39A1	Q9NYL5	469 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	NYAP2	Q9P242	653 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	FEM1B	Q9UK73	627 aa		12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.92	□□□□□ -0.34
PTCD2-208	ENST00000510676	GCN1	Q92616	2671 aa	Known RBP	12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	RAD21	O60216	631 aa		12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	LMNA	P02545	664 aa	Known RBP	12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	ACAP1	Q15027	740 aa		12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	C12orf60	Q5U649	245 aa		12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	DBF4B	Q8NFT6	615 aa		12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	CLP1	Q92989	425 aa	Known RBP	12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	IGFLR1	Q9H665	355 aa		12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	ANTXR1	Q9H6X2	564 aa		12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	DBNL	Q9UJU6	430 aa	Known RBP	12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	RWDD3	Q9Y3V2	267 aa		12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	SALL2	Q9Y467	1007 aa	Predicted RBP	12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	ASH1L	Q9NR48	2969 aa	Known RBP	12.91	□□□□□ -0.34
PTCD2-208	ENST00000510676	LCT	P09848	1927 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	GLP2R	O95838	553 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	CTNNB1	P35222	781 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	PTK7	Q13308	1070 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	PLEKHG4	Q58EX7	1191 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	ZNF618	Q5T7W0	954 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	PPP2R3C	Q969Q6	453 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	GTF2IRD1	Q9UHL9	959 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	SYNPO2	Q9UMS6	1093 aa		12.9	□□□□□ -0.34
PTCD2-208	ENST00000510676	CCDC184	Q52MB2	194 aa		12.89	□□□□□ -0.35
PTCD2-208	ENST00000510676	LRRC47	Q8N1G4	583 aa	Known RBP	12.89	□□□□□ -0.35
PTCD2-208	ENST00000510676	KAT2B	Q92831	832 aa		12.89	□□□□□ -0.35
PTCD2-208	ENST00000510676	TRERF1	Q96PN7	1200 aa		12.89	□□□□□ -0.35
PTCD2-208	ENST00000510676	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	RBAK-RBAKDN	I3L0D1	243 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	GNAI3	P08754	354 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	MTMR3	Q13615	1198 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	PPP2R5B	Q15173	497 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	ALDH1L2	Q3SY69	923 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	LCORL	Q8N3X6	602 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	FIBCD1	Q8N539	461 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	KREMEN2	Q8NCW0	462 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	WNT8B	Q93098	351 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	MKL1	Q969V6	931 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	PURB	Q96QR8	312 aa	Known RBP	12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	PLVAP	Q9BX97	442 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	RC3H2	Q9HBD1	1191 aa	Known RBP	12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	ATP8A2	Q9NTI2	1148 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	SORCS3	Q9UPU3	1222 aa		12.88	□□□□□ -0.35
PTCD2-208	ENST00000510676	CYP2D7	A0A087X1C5	515 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	PNMA6E	A0A0J9YXQ4	647 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	TCRBV5S4A2T	A0A5A2	114 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	BRD1	O95696	1058 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	PDE6A	P16499	860 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	CCDC105	Q8IYK2	499 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	GMCL1P1	Q8NEA9	526 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	SCFD2	Q8WU76	684 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	IL17RA	Q96F46	866 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	IFIH1	Q9BYX4	1025 aa	Known RBP	12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	ADD3	Q9UEY8	706 aa	Known RBP	12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	PLAGL2	Q9UPG8	496 aa		12.87	□□□□□ -0.35
PTCD2-208	ENST00000510676	IGKV6D-41	A0A0C4DH26	115 aa		12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	ALDH5A1	P51649	535 aa	Predicted RBP	12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	ANGPT1	Q15389	498 aa		12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	MUM1L1	Q5H9M0	696 aa		12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	SLC9C2	Q5TAH2	1124 aa		12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	ADGRD2	Q7Z7M1	963 aa		12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	ATP8B4	Q8TF62	1192 aa		12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	P2RX5	Q93086	422 aa		12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	TLR7	Q9NYK1	1049 aa	Known RBP	12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	RALY	Q9UKM9	306 aa	Known RBP	12.86	□□□□□ -0.35
PTCD2-208	ENST00000510676	SPDYE4	A6NLX3	237 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	UPP2	O95045	317 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	ALAS1	P13196	640 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	EDNRB	P24530	442 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	DNAJB1	P25685	340 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	CWF19L1	Q69YN2	538 aa	Known RBP	12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	ZBTB33	Q86T24	672 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	KCNG4	Q8TDN1	519 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	SEPT8	Q92599	483 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	RUBCN	Q92622	972 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	COPS5	Q92905	334 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	HAUS7	Q99871	368 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	HDAC6	Q9UBN7	1215 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	ZBED9	Q6R2W3	1325 aa		12.85	□□□□□ -0.35

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