RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 DESI2Q9BSY9 194 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 SPC25Q9HBM1 224 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 ABLIM1O14639 778 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 TRIM63Q969Q1 353 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 PPWD1Q96BP3 646 aaKnown RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 TBC1D23Q9NUY8 699 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 MT-ND3P03897 115 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 HIBCHQ6NVY1 386 aaPredicted RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 PCDH11XQ9BZA7 1347 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 PCDH11YQ9BZA8 1340 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 IRS4O14654 1257 aaPredicted RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 GRM1Q13255 1194 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 EPS8L2Q9H6S3 715 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 B4E1Z4 1266 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 GYG2O15488 501 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 KLHL38Q2WGJ6 581 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 SESTD1Q86VW0 696 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 TTC1Q99614 292 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 E7EWF7 191 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 KRT38O76015 456 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 CIAO1O76071 339 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PHKBQ93100 1093 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PANK4Q9NVE7 773 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 GAS2L3Q86XJ1 694 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 CROCCP3Q8IVE0 287 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 RHOT2Q8IXI1 618 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 ELOA2Q8IYF1 753 aaPredicted RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 ICA1LQ8NDH6 482 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 CTIFO43310 598 aaKnown RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 GSTA1P08263 222 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 EPN3Q9H201 632 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 ARPP21Q9UBL0 812 aaPredicted RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 ADGRL2O95490 1459 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PSMA4P25789 261 aaKnown RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 DR1Q01658 176 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 LPIN2Q92539 896 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 DHX38Q92620 1227 aaKnown RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 MAP4K1Q92918 833 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 ANKRD12Q6UB98 2062 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 NDUFA8P51970 172 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 ATP6V1G3Q96LB4 118 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 MTA3Q9BTC8 594 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PLAAQ9Y263 795 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PCDHA13Q9Y5I0 950 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 SH3TC1Q8TE82 1336 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 SCYL1Q96KG9 808 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 NCOA5Q9HCD5 579 aaKnown RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 TFAP4Q01664 338 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PDIK1LQ8N165 341 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 USP28Q96RU2 1077 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 S100BP04271 92 aaPredicted RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 TUBA4AP68366 448 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 C1orf146Q5VVC0 180 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 FANCAO15360 1455 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 BACH1O14867 736 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PPP2R2AP63151 447 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 GPBP1Q86WP2 473 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.04□□□□□ -0.962e-7■■■■■ 67.7
HTT-208ENST00000510626 RFX7Q2KHR2 1363 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 USP19O94966 1318 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 E2F4Q16254 413 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 PPP1R14BQ96C90 147 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
HTT-208ENST00000510626 EDEM3Q9BZQ6 932 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 NUB1Q9Y5A7 615 aa9.04□□□□□ -0.96
HTT-208ENST00000510626 CCDC22O60826 627 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 HOXB6P17509 224 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 SGO2Q562F6 1265 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 NXNQ6DKJ4 435 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 RIBC1Q8N443 379 aaPredicted RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 DNAJC17Q9NVM6 304 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 PLEKHG1Q9ULL1 1385 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 KRT8P05787 483 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 SCG2P13521 617 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 HSPA9P38646 679 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 ZFP69BQ9UJL9 534 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 IFNB1P01574 187 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 ZCRB1Q8TBF4 217 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 PYCARDQ9ULZ3 195 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 CD2APQ9Y5K6 639 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 LRRIQ3A6PVS8 624 aaPredicted RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 MEFVO15553 781 aaPredicted RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 RIOK1Q9BRS2 568 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 SEPT10Q9P0V9 454 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 AFPP02771 609 aaKnown RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 TPTE2Q6XPS3 522 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.03□□□□□ -0.96
HTT-208ENST00000510626 EXOC1LA0A1B0GW35 172 aa9.03□□□□□ -0.96
HTT-208ENST00000510626 KRT10P13645 584 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms