RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 UMODL1Q5DID0 1318 aa26.57■■□□□ 1.84
SNF8-209ENST00000510558 MMP3P08254 477 aa26.56■■□□□ 1.84
SNF8-209ENST00000510558 SMAD3P84022 425 aaKnown RBP26.56■■□□□ 1.84
SNF8-209ENST00000510558 NBPF20Q3BBV1 942 aa26.56■■□□□ 1.84
SNF8-209ENST00000510558 IL31RAQ8NI17 732 aa26.56■■□□□ 1.84
SNF8-209ENST00000510558 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.56■■□□□ 1.84
SNF8-209ENST00000510558 NOC4LQ9BVI4 516 aaKnown RBP26.56■■□□□ 1.84
SNF8-209ENST00000510558 TRMT13Q9NUP7 481 aaKnown RBP26.56■■□□□ 1.84
SNF8-209ENST00000510558 SLC12A7Q9Y666 1083 aa26.56■■□□□ 1.84
SNF8-209ENST00000510558 C16orf59Q7L2K0 433 aa26.55■■□□□ 1.84
SNF8-209ENST00000510558 VSIG10LQ86VR7 867 aa26.55■■□□□ 1.84
SNF8-209ENST00000510558 RAB11FIP4Q86YS3 637 aa26.55■■□□□ 1.84
SNF8-209ENST00000510558 SRBD1Q8N5C6 995 aaKnown RBP26.55■■□□□ 1.84
SNF8-209ENST00000510558 NEK1Q96PY6 1258 aa26.55■■□□□ 1.84
SNF8-209ENST00000510558 SEC63Q9UGP8 760 aaKnown RBP26.55■■□□□ 1.84
SNF8-209ENST00000510558 RGS20O76081 388 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 SUPT20HL2P0C7V6 817 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 CCND2P30279 289 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 FAM47CQ5HY64 1035 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 TMEM240Q5SV17 173 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 NFRKBQ6P4R8 1299 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 SGMS1Q86VZ5 419 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 CMTR1Q8N1G2 835 aaKnown RBP26.54■■□□□ 1.84
SNF8-209ENST00000510558 PPP1R13LQ8WUF5 828 aa26.54■■□□□ 1.84
SNF8-209ENST00000510558 ACRP10323 421 aa26.53■■□□□ 1.84
SNF8-209ENST00000510558 TSGA10IPQ3SY00 556 aa26.53■■□□□ 1.84
SNF8-209ENST00000510558 ZNF697Q5TEC3 545 aa26.53■■□□□ 1.84
SNF8-209ENST00000510558 RASEFQ8IZ41 740 aa26.53■■□□□ 1.84
SNF8-209ENST00000510558 EMID1Q96A84 441 aaPredicted RBP26.53■■□□□ 1.84
SNF8-209ENST00000510558 IL23AQ9NPF7 189 aa26.53■■□□□ 1.84
SNF8-209ENST00000510558 LAMA2P24043 3122 aaKnown RBP26.52■■□□□ 1.84
SNF8-209ENST00000510558 CYP2C9P11712 490 aa26.52■■□□□ 1.84
SNF8-209ENST00000510558 CCL23P55773 120 aa26.52■■□□□ 1.84
SNF8-209ENST00000510558 FRMPD4Q14CM0 1322 aa26.52■■□□□ 1.84
SNF8-209ENST00000510558 PSRC1Q6PGN9 363 aaPredicted RBP26.52■■□□□ 1.84
SNF8-209ENST00000510558 KCNV1Q6PIU1 500 aa26.52■■□□□ 1.84
SNF8-209ENST00000510558 MICU3Q86XE3 530 aa26.52■■□□□ 1.84
SNF8-209ENST00000510558 FANCBQ8NB91 859 aa26.52■■□□□ 1.84
SNF8-209ENST00000510558 WNT8AQ9H1J5 351 aa26.52■■□□□ 1.84
SNF8-209ENST00000510558 CASTP20810 708 aaKnown RBP26.51■■□□□ 1.83
SNF8-209ENST00000510558 PTPN11Q06124 597 aaPredicted RBP26.51■■□□□ 1.83
SNF8-209ENST00000510558 LAMC2Q13753 1193 aa26.51■■□□□ 1.83
SNF8-209ENST00000510558 DGKDQ16760 1214 aa26.51■■□□□ 1.83
SNF8-209ENST00000510558 ADCK5Q3MIX3 580 aa26.51■■□□□ 1.83
SNF8-209ENST00000510558 ZNF365Q70YC5 407 aa26.51■■□□□ 1.83
SNF8-209ENST00000510558 DHX32Q7L7V1 743 aaKnown RBP26.51■■□□□ 1.83
SNF8-209ENST00000510558 DHX37Q8IY37 1157 aaKnown RBP26.51■■□□□ 1.83
SNF8-209ENST00000510558 ZFP91Q96JP5 570 aaPredicted RBP26.51■■□□□ 1.83
SNF8-209ENST00000510558 TCEANC2Q96MN5 208 aa26.51■■□□□ 1.83
SNF8-209ENST00000510558 FAM161BQ96MY7 647 aa26.51■■□□□ 1.83
SNF8-209ENST00000510558 CHMP4BP1P59074 171 aa26.5■■□□□ 1.83
SNF8-209ENST00000510558 EXOSC10Q01780 885 aaKnown RBP26.5■■□□□ 1.83
SNF8-209ENST00000510558 KRT32Q14532 448 aa26.5■■□□□ 1.83
SNF8-209ENST00000510558 APOA5Q6Q788 366 aa26.5■■□□□ 1.83
SNF8-209ENST00000510558 SYNE3Q6ZMZ3 975 aa26.5■■□□□ 1.83
SNF8-209ENST00000510558 TMTC3Q6ZXV5 915 aa26.5■■□□□ 1.83
SNF8-209ENST00000510558 PPTC7Q8NI37 304 aa26.5■■□□□ 1.83
SNF8-209ENST00000510558 STXBP5LQ9Y2K9 1186 aa26.5■■□□□ 1.83
SNF8-209ENST00000510558 USP17L6PQ6QN14 398 aa26.49■■□□□ 1.83
SNF8-209ENST00000510558 CCDC82Q8N4S0 544 aa26.49■■□□□ 1.83
SNF8-209ENST00000510558 SMARCC2Q8TAQ2 1214 aa26.49■■□□□ 1.83
SNF8-209ENST00000510558 KAT2BQ92831 832 aa26.49■■□□□ 1.83
SNF8-209ENST00000510558 CUL5Q93034 780 aa26.49■■□□□ 1.83
SNF8-209ENST00000510558 SCN5AQ14524 2016 aa26.49■■□□□ 1.83
SNF8-209ENST00000510558 TANC1Q9C0D5 1861 aa26.49■■□□□ 1.83
SNF8-209ENST00000510558 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.48■■□□□ 1.83
SNF8-209ENST00000510558 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.48■■□□□ 1.83
SNF8-209ENST00000510558 PIK3CDO00329 1044 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 GGPS1O95749 300 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 NEFLP07196 543 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 TGFB3P10600 412 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 UBA1P22314 1058 aaKnown RBP26.48■■□□□ 1.83
SNF8-209ENST00000510558 CELF3Q5SZQ8 465 aaKnown RBP26.48■■□□□ 1.83
SNF8-209ENST00000510558 RASIP1Q5U651 963 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 MYSM1Q5VVJ2 828 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 GPKOWQ92917 476 aaPredicted RBP eCLIP26.48■■□□□ 1.83
SNF8-209ENST00000510558 SCLYQ96I15 445 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 GUCD1Q96NT3 240 aa26.48■■□□□ 1.83
SNF8-209ENST00000510558 DOCK5Q9H7D0 1870 aa26.47■■□□□ 1.83
SNF8-209ENST00000510558 hCG_1642624A0A1W2PR95 340 aa26.47■■□□□ 1.83
SNF8-209ENST00000510558 MEIS2O14770 477 aa26.47■■□□□ 1.83
SNF8-209ENST00000510558 SORBS3O60504 671 aa26.47■■□□□ 1.83
SNF8-209ENST00000510558 MRPS9P82933 396 aaKnown RBP26.47■■□□□ 1.83
SNF8-209ENST00000510558 SP2Q02086 613 aa26.47■■□□□ 1.83
SNF8-209ENST00000510558 BRPF3Q9ULD4 1205 aa26.47■■□□□ 1.83
SNF8-209ENST00000510558 TRIP12Q14669 1992 aaPredicted RBP26.46■■□□□ 1.83
SNF8-209ENST00000510558 STAM2O75886 525 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 FGBP02675 491 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 GNPTABQ3T906 1256 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 SESTD1Q86VW0 696 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 HERVK_113Q902F9 699 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 SPATA33Q96N06 139 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 INPP4AQ96PE3 977 aaPredicted RBP26.46■■□□□ 1.83
SNF8-209ENST00000510558 SEMA6BQ9H3T3 888 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 RBM28Q9NW13 759 aaKnown RBP26.46■■□□□ 1.83
SNF8-209ENST00000510558 NOD1Q9Y239 953 aa26.46■■□□□ 1.83
SNF8-209ENST00000510558 F2P00734 622 aa26.45■■□□□ 1.82
SNF8-209ENST00000510558 HMGB1P09429 215 aaKnown RBP26.45■■□□□ 1.82
SNF8-209ENST00000510558 ZNF286BP0CG31 522 aa26.45■■□□□ 1.82
SNF8-209ENST00000510558 HOXD8P13378 290 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms