RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 COPS5Q92905 334 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 KIF2CQ99661 725 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 PRO3102Q9H379 93 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 RIC8AQ9NPQ8 531 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 TPCN1Q9ULQ1 816 aa13.52□□□□□ -0.25
HMGXB3-203ENST00000510472 GRIN2DO15399 1336 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 TGFB3P10600 412 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 MYCLP12524 364 aaPredicted RBP13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 CCND2P30279 289 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 ICAM3P32942 547 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 CLK2P49760 499 aaKnown RBP13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 AK2P54819 239 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 ARHGAP1Q07960 439 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 UBE2SQ16763 222 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 LY6KQ17RY6 165 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 PCNX4Q63HM2 1172 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 ANKRD33Q7Z3H0 272 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 C7orf61Q8IZ16 206 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 CUL5Q93034 780 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 PHKBQ93100 1093 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 EMID1Q96A84 441 aaPredicted RBP13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 STARD7Q9NQZ5 370 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 RBM27Q9P2N5 1060 aaKnown RBP13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 DNAH12Q6ZR08 3092 aa13.51□□□□□ -0.25
HMGXB3-203ENST00000510472 FRMPD3Q5JV73 1810 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 SPATA31C2B4DYI2 1134 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 PFKFB2O60825 505 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 STAM2O75886 525 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 CABYRO75952 493 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 NAPAP54920 295 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 SP2Q02086 613 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 TLE2Q04725 743 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 SCRN1Q12765 414 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 SEMA3FQ13275 785 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 KCNV1Q6PIU1 500 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 GLT1D1Q96MS3 346 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 TOX2Q96NM4 488 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 ZMYND12Q9H0C1 365 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 LRRC37A2A6NM11 1700 aa13.5□□□□□ -0.25
HMGXB3-203ENST00000510472 ARVCFO00192 962 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 ADAMTS3O15072 1205 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 ZEB2O60315 1214 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 GH1P01241 217 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 HOXD8P13378 290 aaPredicted RBP13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 PURAQ00577 322 aaKnown RBP13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 ANKRD1Q15327 319 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 OR6J1Q8NGC5 347 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 GDF15Q99988 308 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 SLC26A6Q9BXS9 759 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 ZMYND8Q9ULU4 1186 aaPredicted RBP13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 CEP290O15078 2479 aa13.49□□□□□ -0.25
HMGXB3-203ENST00000510472 A0A0U1RQG5 324 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 TRIM43BA6NCK2 446 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 KPNA6O60684 536 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 FOSP01100 380 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 ITGB5P18084 799 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 CPT1AP50416 773 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 ADCY7P51828 1080 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 NEK4P51957 841 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 FAAP100Q0VG06 881 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 CELF3Q5SZQ8 465 aaKnown RBP13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 MYSM1Q5VVJ2 828 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 AFG1LQ8WV93 481 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 CRYGNQ8WXF5 182 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 PDLIM7Q9NR12 457 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 SH3GLB2Q9NR46 395 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 ATP11BQ9Y2G3 1177 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 UBIAD1Q9Y5Z9 338 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 MRVI1Q9Y6F6 885 aa13.48□□□□□ -0.25
HMGXB3-203ENST00000510472 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 SYN1P17600 705 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 UBA1P22314 1058 aaKnown RBP13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 STK3Q13188 491 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 ITGA7Q13683 1181 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 ME3Q16798 604 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 SH3RF1Q7Z6J0 888 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 PPTC7Q8NI37 304 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 SENP7Q9BQF6 1050 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 MTG1Q9BT17 334 aaPredicted RBP13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 SEZ6LQ9BYH1 1024 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
HMGXB3-203ENST00000510472 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms