RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TKFCQ3LXA3 575 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 COL26A1Q96A83 441 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 SMC4Q9NTJ3 1288 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 NYAP2Q9P242 653 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 GTF2IRD1Q9UHL9 959 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 PCDHGC5Q9Y5F6 944 aa12.93□□□□□ -0.34
SNF8-207ENST00000509995 ANKRD11Q6UB99 2663 aaPredicted RBP12.93□□□□□ -0.34
SNF8-207ENST00000509995 UPP2O95045 317 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 ALAS1P13196 640 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 ATF7P17544 494 aaPredicted RBP12.92□□□□□ -0.34
SNF8-207ENST00000509995 BMPR1AP36894 532 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 ALDH5A1P51649 535 aaPredicted RBP12.92□□□□□ -0.34
SNF8-207ENST00000509995 TRIM71Q2Q1W2 868 aaKnown RBP12.92□□□□□ -0.34
SNF8-207ENST00000509995 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
SNF8-207ENST00000509995 AMOTL1Q8IY63 956 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 LRRC47Q8N1G4 583 aaKnown RBP12.92□□□□□ -0.34
SNF8-207ENST00000509995 EFHBQ8N7U6 833 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 COPS5Q92905 334 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 WNT8BQ93098 351 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 ATP8A2Q9NTI2 1148 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
SNF8-207ENST00000509995 RWDD3Q9Y3V2 267 aa12.92□□□□□ -0.34
SNF8-207ENST00000509995 ZNF532Q9HCE3 1301 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 KIAA1671Q9BY89 1806 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 LOC102724159A0A0B4J2E5 919 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 PRKAB2O43741 272 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 GLP2RO95838 553 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 LMNAP02545 664 aaKnown RBP12.91□□□□□ -0.34
SNF8-207ENST00000509995 PTK7Q13308 1070 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 CAMK1Q14012 370 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 PWP2Q15269 919 aaKnown RBP12.91□□□□□ -0.34
SNF8-207ENST00000509995 PLEKHG4Q58EX7 1191 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 MUM1L1Q5H9M0 696 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 NSMFQ6X4W1 530 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 RPAP2Q8IXW5 612 aaPredicted RBP12.91□□□□□ -0.34
SNF8-207ENST00000509995 FIBCD1Q8N539 461 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 KCNG4Q8TDN1 519 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 SUSD6Q92537 303 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
SNF8-207ENST00000509995 ARMT1Q9H993 441 aa12.91□□□□□ -0.34
SNF8-207ENST00000509995 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
SNF8-207ENST00000509995 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 STAT2P52630 851 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 OS9Q13438 667 aaPredicted RBP12.9□□□□□ -0.34
SNF8-207ENST00000509995 MTMR3Q13615 1198 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 ADGRD2Q7Z7M1 963 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 KREMEN2Q8NCW0 462 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 KAT2BQ92831 832 aa12.9□□□□□ -0.34
SNF8-207ENST00000509995 API5Q9BZZ5 524 aaKnown RBP12.9□□□□□ -0.34
SNF8-207ENST00000509995 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
SNF8-207ENST00000509995 RALYQ9UKM9 306 aaKnown RBP12.9□□□□□ -0.34
SNF8-207ENST00000509995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.89□□□□□ -0.35
SNF8-207ENST00000509995 MMP3P08254 477 aa12.89□□□□□ -0.35
SNF8-207ENST00000509995 CLCN5P51795 746 aa12.89□□□□□ -0.35
SNF8-207ENST00000509995 CLP1Q92989 425 aaKnown RBP12.89□□□□□ -0.35
SNF8-207ENST00000509995 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
SNF8-207ENST00000509995 SEMA4AQ9H3S1 761 aa12.89□□□□□ -0.35
SNF8-207ENST00000509995 HDAC6Q9UBN7 1215 aa12.89□□□□□ -0.35
SNF8-207ENST00000509995 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
SNF8-207ENST00000509995 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
SNF8-207ENST00000509995 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
SNF8-207ENST00000509995 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 BRD1O95696 1058 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 BMP3P12645 472 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 RASA1P20936 1047 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 NRIP1P48552 1158 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 PDE4BQ07343 736 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 ACAP1Q15027 740 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
SNF8-207ENST00000509995 ANGPT1Q15389 498 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 C7orf31Q8N865 590 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 PLVAPQ9BX97 442 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
SNF8-207ENST00000509995 RSPH10B2B2RC85 870 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 MBD4O95243 580 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 GNAI2P04899 355 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 RSPH10BP0C881 870 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 TXNP10599 105 aaKnown RBP12.87□□□□□ -0.35
SNF8-207ENST00000509995 BAATQ14032 418 aaPredicted RBP12.87□□□□□ -0.35
SNF8-207ENST00000509995 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
SNF8-207ENST00000509995 FAM160B2Q86V87 743 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 SEPT8Q92599 483 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 MKL1Q969V6 931 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
SNF8-207ENST00000509995 HINFPQ9BQA5 517 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 MFSD1Q9H3U5 465 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 RC3H2Q9HBD1 1191 aaKnown RBP12.87□□□□□ -0.35
SNF8-207ENST00000509995 PLAGL2Q9UPG8 496 aa12.87□□□□□ -0.35
SNF8-207ENST00000509995 GPR179Q6PRD1 2367 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms