RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	IL23A	Q9NPF7	189 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	WDR70	Q9NW82	654 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	TSR3	Q9UJK0	312 aa	Known RBP	11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	ADAMTS5	Q9UNA0	930 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	SNX14	Q9Y5W7	946 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	TAF6L	Q9Y6J9	622 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	TECTA	O75443	2155 aa		11.98	□□□□□ -0.49
PTPN20-222	ENST00000509774	PRC1	O43663	620 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	COBL	O75128	1261 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	SNHG28	P0DPA3	235 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	EXOSC10	Q01780	885 aa	Known RBP	11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	WTAP	Q15007	396 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	TMEM67	Q5HYA8	995 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	KIAA1755	Q5JYT7	1200 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	RNF180	Q86T96	592 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	SPICE1	Q8N0Z3	855 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	PNMA1	Q8ND90	353 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	ZKSCAN3	Q9BRR0	538 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	PPP1R12C	Q9BZL4	782 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	TANGO6	Q9C0B7	1094 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	STARD7	Q9NQZ5	370 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	PCDHA11	Q9Y5I1	949 aa		11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	GREB1L	Q9C091	1923 aa	Predicted RBP	11.97	□□□□□ -0.49
PTPN20-222	ENST00000509774	RIF1	Q5UIP0	2472 aa	Known RBP	11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	PLXNA3	P51805	1871 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	GRXCR2	A6NFK2	248 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	RAD21	O60216	631 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	FLOT1	O75955	427 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	RARB	P10826	455 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	STAT2	P52630	851 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	ANTXR2	P58335	489 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	FAM83B	Q5T0W9	1011 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	BLOC1S2	Q6QNY1	142 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	BTNL9	Q6UXG8	535 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	HFE2	Q6ZVN8	426 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	OTOP2	Q7RTS6	562 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	SGMS1	Q86VZ5	419 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	LRRC47	Q8N1G4	583 aa	Known RBP	11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	PRSS33	Q8NF86	280 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	MTIF3	Q9H2K0	278 aa	Known RBP	11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	CERS4	Q9HA82	394 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	UPF2	Q9HAU5	1272 aa	Known RBP	11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	PNMA2	Q9UL42	364 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	PPP1R9A	Q9ULJ8	1098 aa		11.96	□□□□□ -0.49
PTPN20-222	ENST00000509774	FAM186A	A6NE01	2351 aa		11.96	□□□□□ -0.5
PTPN20-222	ENST00000509774	KMT2E	Q8IZD2	1858 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	LAMA4	Q16363	1823 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	SCN5A	Q14524	2016 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	ATP2A1	O14983	1001 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	DCX	O43602	365 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	ADAMTS4	O75173	837 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	FGB	P02675	491 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	CALM1	P0DP23	149 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	CALM2	P0DP24	149 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	CALM3	P0DP25	149 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	PDHB	P11177	359 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	SSTR3	P32745	418 aa	Predicted RBP	11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	CYP2C18	P33260	490 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	CDK7	P50613	346 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	ACLY	P53396	1101 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	RCAN1	P53805	252 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	KCNC4	Q03721	635 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	PPP2R5B	Q15173	497 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	ADCK5	Q3MIX3	580 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	ASPRV1	Q53RT3	343 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	CATIP	Q7Z7H3	387 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	LENG1	Q96BZ8	264 aa	Predicted RBP	11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	SLF1	Q9BQI6	1058 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	PTPRS	Q13332	1948 aa		11.95	□□□□□ -0.5
PTPN20-222	ENST00000509774	EPG5	Q9HCE0	2579 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	MYH8	P13535	1937 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	CCDC69	A6NI79	296 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	TMEM232	C9JQI7	657 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	SH2B2	O14492	632 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	ZBED4	O75132	1171 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	CA3	P07451	260 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	RPS6KB1	P23443	525 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	SMARCA1	P28370	1054 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	COPB2	P35606	906 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	OAZ1	P54368	228 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	ZNF543	Q08ER8	600 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	SYNE3	Q6ZMZ3	975 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	RUFY3	Q7L099	469 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	JAKMIP1	Q96N16	626 aa	Known RBP	11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	TSEN34	Q9BSV6	310 aa	Known RBP	11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	AGXT2	Q9BYV1	514 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	LY9	Q9HBG7	655 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	CYP46A1	Q9Y6A2	500 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	COL11A1	P12107	1806 aa	Predicted RBP	11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	PARP14	Q460N5	1801 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	MCM3AP	O60318	1980 aa		11.94	□□□□□ -0.5
PTPN20-222	ENST00000509774	MROH7	Q68CQ1	1323 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	VWA5A	O00534	786 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	STRN	O43815	780 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	GFRA3	O60609	400 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	LPXN	O60711	386 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	DDAH1	O94760	285 aa		11.93	□□□□□ -0.5
PTPN20-222	ENST00000509774	ARHGEF15	O94989	841 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms