RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 RIC8AQ9NPQ8 531 aa18.79■□□□□ 0.6
SKP2-205ENST00000509692 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
SKP2-205ENST00000509692 SMC3Q9UQE7 1217 aa18.79■□□□□ 0.6
SKP2-205ENST00000509692 GNEQ9Y223 722 aaKnown RBP18.79■□□□□ 0.6
SKP2-205ENST00000509692 NR2E3Q9Y5X4 410 aa18.79■□□□□ 0.6
SKP2-205ENST00000509692 ESYT2A0FGR8 921 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 SMPD1P17405 629 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 HOXA13P31271 388 aaPredicted RBP18.78■□□□□ 0.6
SKP2-205ENST00000509692 ADCY7P51828 1080 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 CCSAPQ6IQ19 270 aaPredicted RBP18.78■□□□□ 0.6
SKP2-205ENST00000509692 C7orf61Q8IZ16 206 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 INTS4Q96HW7 963 aaKnown RBP18.78■□□□□ 0.6
SKP2-205ENST00000509692 ZMYND12Q9H0C1 365 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 C6orf50Q9HD87 102 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 PHF24Q9UPV7 400 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 LAMA2P24043 3122 aaKnown RBP18.78■□□□□ 0.6
SKP2-205ENST00000509692 PIK3CDO00329 1044 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 CTAGE5O15320 804 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 GJB2P29033 226 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 MRPL12P52815 198 aaKnown RBP18.78■□□□□ 0.6
SKP2-205ENST00000509692 GJA9P57773 515 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 NLRP5P59047 1200 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 PDE4DQ08499 809 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
SKP2-205ENST00000509692 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
SKP2-205ENST00000509692 UPF3AQ9H1J1 476 aaKnown RBP18.78■□□□□ 0.6
SKP2-205ENST00000509692 MEIS2O14770 477 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 C6orf222P0C671 652 aaPredicted RBP18.77■□□□□ 0.6
SKP2-205ENST00000509692 GNA11P29992 359 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 FOSBP53539 338 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 BECN1Q14457 450 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 IQSEC1Q6DN90 963 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 USP17L6PQ6QN14 398 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 NSUN6Q8TEA1 469 aaKnown RBP18.77■□□□□ 0.6
SKP2-205ENST00000509692 RMDN3Q96TC7 470 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 GJB4Q9NTQ9 266 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 KIF3AQ9Y496 699 aa18.77■□□□□ 0.6
SKP2-205ENST00000509692 RBM47A0AV96 593 aaKnown RBP18.76■□□□□ 0.59
SKP2-205ENST00000509692 TRIM29Q14134 588 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 KCNA10Q16322 511 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 UBE2SQ16763 222 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 SLC39A5Q6ZMH5 540 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 TSEN34Q9BSV6 310 aaKnown RBP18.76■□□□□ 0.59
SKP2-205ENST00000509692 PHF20Q9BVI0 1012 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 FOXD4L1Q9NU39 408 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 PCDH10Q9P2E7 1040 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 KCNJ14Q9UNX9 436 aa18.76■□□□□ 0.59
SKP2-205ENST00000509692 A0A1W2PQ45 241 aaPredicted RBP18.75■□□□□ 0.59
SKP2-205ENST00000509692 A0A1W2PQY0 241 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
SKP2-205ENST00000509692 CST5P28325 142 aaPredicted RBP18.75■□□□□ 0.59
SKP2-205ENST00000509692 ACLYP53396 1101 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 NKX3-2P78367 333 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 TLK2Q86UE8 772 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 FCHSD1Q86WN1 690 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 TEX2Q8IWB9 1127 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 BICD2Q8TD16 824 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 C8orf76Q96K31 380 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 MPHOSPH6Q99547 160 aaKnown RBP18.75■□□□□ 0.59
SKP2-205ENST00000509692 WDR11Q9BZH6 1224 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 PXMP2Q9NR77 195 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 ZMYND8Q9ULU4 1186 aaPredicted RBP18.75■□□□□ 0.59
SKP2-205ENST00000509692 KIAA1217Q5T5P2 1943 aa18.75■□□□□ 0.59
SKP2-205ENST00000509692 DYNC1LI2O43237 492 aaPredicted RBP18.74■□□□□ 0.59
SKP2-205ENST00000509692 EIF2AK2P19525 551 aaKnown RBP18.74■□□□□ 0.59
SKP2-205ENST00000509692 DUSP28Q4G0W2 176 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 GNASQ5JWF2 1037 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 GALNT17Q6IS24 598 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 IWS1Q96ST2 819 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 SPC25Q9HBM1 224 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 PCDHA4Q9UN74 947 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 B4DLN1 442 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 ADAMTS3O15072 1205 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 ASGR1P07306 291 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 RTP1P59025 263 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 BEX3Q00994 111 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 SNX17Q15036 470 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 ARHGEF16Q5VV41 709 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 KRT40Q6A162 431 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 DAGLBQ8NCG7 672 aa18.74■□□□□ 0.59
SKP2-205ENST00000509692 MOXD2PA6NHM9 499 aa18.73■□□□□ 0.59
SKP2-205ENST00000509692 SYN1P17600 705 aa18.73■□□□□ 0.59
SKP2-205ENST00000509692 CLK2P49760 499 aaKnown RBP18.73■□□□□ 0.59
SKP2-205ENST00000509692 NPY5RQ15761 445 aa18.73■□□□□ 0.59
SKP2-205ENST00000509692 BLIDQ8IZY5 108 aa18.73■□□□□ 0.59
SKP2-205ENST00000509692 REXO1Q8N1G1 1221 aaKnown RBP18.73■□□□□ 0.59
SKP2-205ENST00000509692 TSHZ2Q9NRE2 1034 aa18.73■□□□□ 0.59
SKP2-205ENST00000509692 TMEM260Q9NX78 707 aa18.73■□□□□ 0.59
SKP2-205ENST00000509692 SZT2Q5T011 3432 aa18.73■□□□□ 0.59
SKP2-205ENST00000509692 SPDYE3A6NKU9 549 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 ARIH2O95376 493 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 MMP1P03956 469 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 NR3C2P08235 984 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 ANP32AP39687 249 aaKnown RBP18.72■□□□□ 0.59
SKP2-205ENST00000509692 GUCY1B3Q02153 619 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 STXBP2Q15833 593 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 FSCN1Q16658 493 aaKnown RBP18.72■□□□□ 0.59
SKP2-205ENST00000509692 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 JAKMIP3Q5VZ66 844 aa18.72■□□□□ 0.59
SKP2-205ENST00000509692 PCSK9Q8NBP7 692 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms