RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 LEFTY1O75610 366 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 HSPA6P17066 643 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ENDOUP21128 410 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 CCND1P24385 295 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ASPAP45381 313 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ERVK-21P61565 698 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 SLBPQ14493 270 aaKnown RBP eCLIP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 MAPRE1Q15691 268 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 CLEC4GQ6UXB4 293 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ADAT2Q7Z6V5 191 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 SMG8Q8ND04 991 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ENOX1Q8TC92 643 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 TP53INP1Q96A56 240 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 E2F7Q96AV8 911 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 SCLYQ96I15 445 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ELAC2Q9BQ52 826 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 C1GALT1Q9NS00 363 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 GPR27Q9NS67 375 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 APEX2Q9UBZ4 518 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 CGGBP1Q9UFW8 167 aaPredicted RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 SWAP70Q9UH65 585 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 PCOLCE2Q9UKZ9 415 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ZNF652Q9Y2D9 606 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 KLRG2A4D1S0 409 aaPredicted RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 C9IYK1 514 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 PAX3P23760 479 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 MECP2P51608 486 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 PHC1P78364 1004 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 NTRK3Q16288 839 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 NBPF9Q3BBW0 867 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 GRAMD1BQ3KR37 738 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 PRR16Q569H4 304 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 IQSEC1Q6DN90 963 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 UBE2Q2Q8WVN8 375 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 GJA10Q969M2 543 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 UTP4Q969X6 686 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 C1orf159Q96HA4 380 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 MYRFLQ96LU7 910 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 HERPUD2Q9BSE4 406 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 LGR4Q9BXB1 951 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 CELF4Q9BZC1 486 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 ACSS3Q9H6R3 686 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 SAMD15Q9P1V8 674 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 LUC7L2Q9Y383 392 aaKnown RBP2.83□□□□□ -1.96
PDE4D-218ENST00000509368 MRFAP1Q9Y605 127 aa2.83□□□□□ -1.96
PDE4D-218ENST00000509368 TRBV23OR9-2A0A075B6M9 112 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 PRR33A8MZF0 331 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 KPNA6O60684 536 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 PRKD3O94806 890 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 FKBP9O95302 570 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CT47B1P0C2W7 299 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 TYRP1P17643 537 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 KCNA6P17658 529 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 LPOP22079 712 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CYP7A1P22680 504 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 TMPRSS15P98073 1019 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 SLC9A5Q14940 896 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 ATP13A4Q4VNC1 1196 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 PIK3R6Q5UE93 754 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 PRAMEF13Q5VWM6 474 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 SLC4A10Q6U841 1118 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 LHFPL2Q6ZUX7 228 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 FKBP9P1Q75LS8 142 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 FGD2Q7Z6J4 655 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 SAPCD2Q86UD0 394 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 SMAP1Q8IYB5 467 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CBARPQ8N350 705 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 FBXL6Q8N531 539 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 DNAJB8Q8NHS0 232 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 PPP1R13LQ8WUF5 828 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 GATA6Q92908 595 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 RUNDC1Q96C34 613 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 ZNF512BQ96KM6 892 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 KREMEN1Q96MU8 473 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 ARPC5LQ9BPX5 153 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 MKRN2Q9H000 416 aaKnown RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CYP4F12Q9HCS2 524 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 JADE2Q9NQC1 790 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 ST14Q9Y5Y6 855 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 WIZO95785 1651 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 KIF13AQ9H1H9 1805 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 ERICH3Q5RHP9 1530 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CCDC189A1A4V9 331 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 FAM170BA6NMN3 283 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 FZD9O00144 591 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 NRDCO43847 1150 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 WDHD1O75717 1129 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 LTFP02788 710 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 TP53P04637 393 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 NOP2P46087 812 aaKnown RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 IL2P60568 153 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 AMPD2Q01433 879 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 KCNAB2Q13303 367 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 SAFBQ15424 915 aaKnown RBP eCLIP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 INO80DQ53TQ3 878 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 FAM47CQ5HY64 1035 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 SEZ6L2Q6UXD5 910 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CHST15Q7LFX5 561 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 OTOP1Q7RTM1 612 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms