RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 PCDHA6Q9UN73 950 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 Q9Y3F1 56 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 PCDHA8Q9Y5H6 950 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 MYH7BA7E2Y1 1941 aa23.14■■□□□ 1.29
HOXC6-204ENST00000509328 MYCNP04198 464 aaPredicted RBP23.13■■□□□ 1.29
HOXC6-204ENST00000509328 GNA11P29992 359 aa23.13■■□□□ 1.29
HOXC6-204ENST00000509328 GJA9P57773 515 aa23.13■■□□□ 1.29
HOXC6-204ENST00000509328 TTLL4Q14679 1199 aa23.13■■□□□ 1.29
HOXC6-204ENST00000509328 XRRA1Q6P2D8 792 aa23.13■■□□□ 1.29
HOXC6-204ENST00000509328 SEPT14Q6ZU15 432 aa23.13■■□□□ 1.29
HOXC6-204ENST00000509328 FAM177A1Q8N128 213 aaPredicted RBP23.13■■□□□ 1.29
HOXC6-204ENST00000509328 NKRFO15226 690 aaKnown RBP eCLIP23.12■■□□□ 1.29
HOXC6-204ENST00000509328 STAM2O75886 525 aa23.12■■□□□ 1.29
HOXC6-204ENST00000509328 CLK2P49760 499 aaKnown RBP23.12■■□□□ 1.29
HOXC6-204ENST00000509328 AP3B2Q13367 1082 aa23.12■■□□□ 1.29
HOXC6-204ENST00000509328 PCNX4Q63HM2 1172 aa23.12■■□□□ 1.29
HOXC6-204ENST00000509328 TLK2Q86UE8 772 aa23.12■■□□□ 1.29
HOXC6-204ENST00000509328 AP5M1Q9H0R1 490 aa23.12■■□□□ 1.29
HOXC6-204ENST00000509328 C11orf49Q9H6J7 331 aa23.12■■□□□ 1.29
HOXC6-204ENST00000509328 ORC3Q9UBD5 711 aaPredicted RBP23.12■■□□□ 1.29
HOXC6-204ENST00000509328 C6orf222P0C671 652 aaPredicted RBP23.11■■□□□ 1.29
HOXC6-204ENST00000509328 TXNP10599 105 aaKnown RBP23.11■■□□□ 1.29
HOXC6-204ENST00000509328 COL6A1P12109 1028 aa23.11■■□□□ 1.29
HOXC6-204ENST00000509328 CST5P28325 142 aaPredicted RBP23.11■■□□□ 1.29
HOXC6-204ENST00000509328 NKX3-2P78367 333 aa23.11■■□□□ 1.29
HOXC6-204ENST00000509328 TMEM63BQ5T3F8 832 aa23.11■■□□□ 1.29
HOXC6-204ENST00000509328 MCTP2Q6DN12 878 aa23.11■■□□□ 1.29
HOXC6-204ENST00000509328 NSUN7Q8NE18 718 aaKnown RBP23.11■■□□□ 1.29
HOXC6-204ENST00000509328 KLHDC9Q8NEP7 349 aa23.11■■□□□ 1.29
HOXC6-204ENST00000509328 BICD2Q8TD16 824 aa23.11■■□□□ 1.29
HOXC6-204ENST00000509328 WASF1Q92558 559 aa23.11■■□□□ 1.29
HOXC6-204ENST00000509328 DYNC1LI2O43237 492 aaPredicted RBP23.1■■□□□ 1.29
HOXC6-204ENST00000509328 RGS20O76081 388 aa23.1■■□□□ 1.29
HOXC6-204ENST00000509328 NLRP5P59047 1200 aa23.1■■□□□ 1.29
HOXC6-204ENST00000509328 MRPS9P82933 396 aaKnown RBP23.1■■□□□ 1.29
HOXC6-204ENST00000509328 ST3GAL1Q11201 340 aa23.1■■□□□ 1.29
HOXC6-204ENST00000509328 CCDC62Q6P9F0 684 aa23.1■■□□□ 1.29
HOXC6-204ENST00000509328 KCNV1Q6PIU1 500 aa23.1■■□□□ 1.29
HOXC6-204ENST00000509328 REXO1Q8N1G1 1221 aaKnown RBP23.1■■□□□ 1.29
HOXC6-204ENST00000509328 AIFM3Q96NN9 605 aa23.1■■□□□ 1.29
HOXC6-204ENST00000509328 TSEN34Q9BSV6 310 aaKnown RBP23.1■■□□□ 1.29
HOXC6-204ENST00000509328 TMEM260Q9NX78 707 aa23.1■■□□□ 1.29
HOXC6-204ENST00000509328 MKI67P46013 3256 aaKnown RBP23.09■■□□□ 1.29
HOXC6-204ENST00000509328 ARIH2O95376 493 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 XBP1P17861 261 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 MCM2P49736 904 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 GNPTABQ3T906 1256 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 CCDC83Q8IWF9 413 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 ZFP91Q96JP5 570 aaPredicted RBP23.09■■□□□ 1.29
HOXC6-204ENST00000509328 HTATIP2Q9BUP3 242 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 ANO3Q9BYT9 981 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 PHF24Q9UPV7 400 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 MRVI1Q9Y6F6 885 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 ALPK3Q96L96 1907 aa23.09■■□□□ 1.29
HOXC6-204ENST00000509328 MYADML2A6NDP7 307 aa23.08■■□□□ 1.29
HOXC6-204ENST00000509328 CTAGE5O15320 804 aa23.08■■□□□ 1.29
HOXC6-204ENST00000509328 FDPSP14324 419 aaKnown RBP23.08■■□□□ 1.29
HOXC6-204ENST00000509328 GNASQ5JWF2 1037 aa23.08■■□□□ 1.29
HOXC6-204ENST00000509328 JAKMIP3Q5VZ66 844 aa23.08■■□□□ 1.29
HOXC6-204ENST00000509328 CCSAPQ6IQ19 270 aaPredicted RBP23.08■■□□□ 1.29
HOXC6-204ENST00000509328 PCSK9Q8NBP7 692 aaKnown RBP23.08■■□□□ 1.29
HOXC6-204ENST00000509328 PGBD1Q96JS3 809 aa23.08■■□□□ 1.29
HOXC6-204ENST00000509328 INPP4AQ96PE3 977 aaPredicted RBP23.08■■□□□ 1.29
HOXC6-204ENST00000509328 LLPHQ9BRT6 129 aaKnown RBP23.08■■□□□ 1.29
HOXC6-204ENST00000509328 DDX41Q9UJV9 622 aaKnown RBP23.08■■□□□ 1.29
HOXC6-204ENST00000509328 TNRC18O15417 2968 aaPredicted RBP23.08■■□□□ 1.29
HOXC6-204ENST00000509328 MOXD2PA6NHM9 499 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 DTNBO60941 627 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 TGFB3P10600 412 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 PTGS1P23219 599 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 IRX5P78411 483 aaPredicted RBP23.07■■□□□ 1.28
HOXC6-204ENST00000509328 KCNA10Q16322 511 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 FSCN1Q16658 493 aaKnown RBP23.07■■□□□ 1.28
HOXC6-204ENST00000509328 LY6KQ17RY6 165 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 GALNT17Q6IS24 598 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 OR6J1Q8NGC5 347 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 SENP6Q9GZR1 1112 aaPredicted RBP23.07■■□□□ 1.28
HOXC6-204ENST00000509328 RTEL1Q9NZ71 1219 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 PCDHA4Q9UN74 947 aa23.07■■□□□ 1.28
HOXC6-204ENST00000509328 ADAMTS3O15072 1205 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 JAK2O60674 1132 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 GH1P01241 217 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 ICAM3P32942 547 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 SREBF1P36956 1147 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 ACLYP53396 1101 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 BEX3Q00994 111 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 NLRX1Q86UT6 975 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 DAGLBQ8NCG7 672 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 COPS5Q92905 334 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 ALG1Q9BT22 464 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 DOCK5Q9H7D0 1870 aa23.06■■□□□ 1.28
HOXC6-204ENST00000509328 FIBPO43427 364 aa23.05■■□□□ 1.28
HOXC6-204ENST00000509328 ZEB2O60315 1214 aa23.05■■□□□ 1.28
HOXC6-204ENST00000509328 CD2BP2O95400 341 aaKnown RBP23.05■■□□□ 1.28
HOXC6-204ENST00000509328 CPT1AP50416 773 aa23.05■■□□□ 1.28
HOXC6-204ENST00000509328 BLIDQ8IZY5 108 aa23.05■■□□□ 1.28
HOXC6-204ENST00000509328 PHF20Q9BVI0 1012 aa23.05■■□□□ 1.28
HOXC6-204ENST00000509328 UBIAD1Q9Y5Z9 338 aa23.05■■□□□ 1.28
HOXC6-204ENST00000509328 SPATA31C2B4DYI2 1134 aa23.04■■□□□ 1.28
HOXC6-204ENST00000509328 ASGR1P07306 291 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms