RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PRPHP41219 470 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 ME1P48163 572 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 UBE2HP62256 183 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 NBR1Q14596 966 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 ZNF174Q15697 407 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 Q3C1V9 767 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 WDR78Q5VTH9 848 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 ARHGEF16Q5VV41 709 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 PCNX4Q63HM2 1172 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 CHAMP1Q96JM3 812 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 MBOAT7Q96N66 472 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 IWS1Q96ST2 819 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 RMDN3Q96TC7 470 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 COL20A1Q9P218 1284 aa11.78□□□□□ -0.52
RFC1-211ENST00000509084 TBX3O15119 743 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 PTPREP23469 700 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 CCND2P30279 289 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 PTGDRQ13258 359 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 PGM5Q15124 567 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 CALCRLQ16602 461 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
RFC1-211ENST00000509084 Q4G0T1 1027 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 ADALQ6DHV7 355 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 C17orf99Q6UX52 265 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 NIPA1Q7RTP0 329 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 SLFN12Q8IYM2 578 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
RFC1-211ENST00000509084 TAAR1Q96RJ0 339 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 CFHR5Q9BXR6 569 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 RAB34Q9BZG1 259 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 PORCNQ9H237 461 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.53
RFC1-211ENST00000509084 DDX25Q9UHL0 483 aaKnown RBP11.77□□□□□ -0.53
RFC1-211ENST00000509084 SRPRBQ9Y5M8 271 aaKnown RBP11.77□□□□□ -0.53
RFC1-211ENST00000509084 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 DNAJC25-GNG10A0A024R161 153 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 A0A1W2PQ27 194 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 A0A1W2PQ64 194 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 A0A1W2PQD8 194 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 WNT7AO00755 349 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 MARCH6O60337 910 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 PEX10O60683 326 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 AOC2O75106 756 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 TDP2O95551 362 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 EIF2AK2P19525 551 aaKnown RBP11.76□□□□□ -0.53
RFC1-211ENST00000509084 CRHR2Q13324 411 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 TMEM266Q2M3C6 531 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 CEP55Q53EZ4 464 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 ZIC5Q96T25 663 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 SLC5A4Q9NY91 659 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
RFC1-211ENST00000509084 SLC15A5A6NIM6 579 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 NR3C2P08235 984 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
RFC1-211ENST00000509084 VEGFBP49765 207 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
RFC1-211ENST00000509084 GRB14Q14449 540 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 DTHD1Q6ZMT9 781 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 GPR142Q7Z601 462 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
RFC1-211ENST00000509084 NLRX1Q86UT6 975 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 SOCS4Q8WXH5 440 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 CDHR1Q96JP9 859 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 AK8Q96MA6 479 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 FAM20AQ96MK3 541 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 MXRA8Q9BRK3 442 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 FBXO2Q9UK22 296 aaPredicted RBP11.75□□□□□ -0.53
RFC1-211ENST00000509084 PCDHA7Q9UN72 937 aa11.75□□□□□ -0.53
RFC1-211ENST00000509084 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
RFC1-211ENST00000509084 LCTP09848 1927 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 ASB14A6NK59 587 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 FAM86B1E9PN63 330 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 MAFGO15525 162 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 SLC37A4O43826 429 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 EDIL3O43854 480 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 FAM86B2P0C5J1 330 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 HSPA6P17066 643 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 EDNRBP24530 442 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 ADORA2AP29274 412 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
RFC1-211ENST00000509084 TXLNAP40222 546 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 UBXN2AP68543 259 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 STXBP2Q15833 593 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 GNPTABQ3T906 1256 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 PRR16Q569H4 304 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 PLA2G4DQ86XP0 818 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
RFC1-211ENST00000509084 GPRASP2Q96D09 838 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
RFC1-211ENST00000509084 PYM1Q9BRP8 204 aaKnown RBP11.74□□□□□ -0.53
RFC1-211ENST00000509084 TMEM60Q9H2L4 133 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms