RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 RAPGEF4Q8WZA2 1011 aa6.15□□□□□ -1.42
NUP54-206ENST00000508465 ZNF281Q9Y2X9 895 aa6.15□□□□□ -1.42
NUP54-206ENST00000508465 WASHC2AQ641Q2 1341 aa6.15□□□□□ -1.43
NUP54-206ENST00000508465 DISP2A7MBM2 1401 aa6.15□□□□□ -1.43
NUP54-206ENST00000508465 LTN1O94822 1766 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 SHISA3A0PJX4 238 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 NRDCO43847 1150 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 EIF4A2Q14240 407 aaKnown RBP6.14□□□□□ -1.43
NUP54-206ENST00000508465 SKOR2Q2VWA4 1001 aaPredicted RBP6.14□□□□□ -1.43
NUP54-206ENST00000508465 CEP128Q6ZU80 1094 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 SP8Q8IXZ3 490 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 G6PC3Q9BUM1 346 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 NOC4LQ9BVI4 516 aaKnown RBP6.14□□□□□ -1.43
NUP54-206ENST00000508465 PODXL2Q9NZ53 605 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 TLR6Q9Y2C9 796 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 INSRP06213 1382 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 MYOM1P52179 1685 aa6.14□□□□□ -1.43
NUP54-206ENST00000508465 USP2O75604 605 aaPredicted RBP6.13□□□□□ -1.43
NUP54-206ENST00000508465 PNLIPP16233 465 aa6.13□□□□□ -1.43
NUP54-206ENST00000508465 GBP1P32455 592 aa6.13□□□□□ -1.43
NUP54-206ENST00000508465 MTHFSP49914 203 aa6.13□□□□□ -1.43
NUP54-206ENST00000508465 PCBP3P57721 371 aaKnown RBP6.13□□□□□ -1.43
NUP54-206ENST00000508465 PHACTR4Q8IZ21 702 aa6.13□□□□□ -1.43
NUP54-206ENST00000508465 SYTL5Q8TDW5 730 aaPredicted RBP6.13□□□□□ -1.43
NUP54-206ENST00000508465 PDGFDQ9GZP0 370 aaPredicted RBP6.13□□□□□ -1.43
NUP54-206ENST00000508465 FLT4P35916 1363 aa6.13□□□□□ -1.43
NUP54-206ENST00000508465 OVOS2A0A0G2JMS6 1433 aa6.13□□□□□ -1.43
NUP54-206ENST00000508465 KAT6BQ8WYB5 2073 aa6.13□□□□□ -1.43
NUP54-206ENST00000508465 SLC22A31A6NKX4 558 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 NOTOA8MTQ0 251 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 PLSCR1O15162 318 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 CYP27B1O15528 508 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 CILPO75339 1184 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 ADRB1P08588 477 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 RGPD2P0DJD1 1756 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 VIPR1P32241 457 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 YBX1P67809 324 aaKnown RBP6.12□□□□□ -1.43
NUP54-206ENST00000508465 NMIQ13287 307 aaPredicted RBP6.12□□□□□ -1.43
NUP54-206ENST00000508465 TAF1CQ15572 869 aaPredicted RBP6.12□□□□□ -1.43
NUP54-206ENST00000508465 TXNRD1Q16881 649 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 CNKSR3Q6P9H4 555 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 AEBP1Q8IUX7 1158 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 ZDHHC14Q8IZN3 488 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 FEZF2Q8TBJ5 459 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 PEAK1Q9H792 1746 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 CNTD2Q9H8S5 307 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 KLHL3Q9UH77 587 aa6.12□□□□□ -1.43
NUP54-206ENST00000508465 PARP4Q9UKK3 1724 aaKnown RBP6.11□□□□□ -1.43
NUP54-206ENST00000508465 USP54Q70EL1 1684 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 MEGF6O75095 1541 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 RTL1A6NKG5 1358 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 CHURC1-FNTBB4DL54 471 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 MPOP05164 745 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 ARL4AP40617 200 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 EPHB3P54753 998 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 TMEM62Q0P6H9 643 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 MEI1Q5TIA1 1274 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 ZNF655Q8N720 491 aaPredicted RBP6.11□□□□□ -1.43
NUP54-206ENST00000508465 DAGLBQ8NCG7 672 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 PHC3Q8NDX5 983 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 GATAD2BQ8WXI9 593 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 FOXP3Q9BZS1 431 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 REV1Q9UBZ9 1251 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 TCFL5Q9UL49 500 aa6.11□□□□□ -1.43
NUP54-206ENST00000508465 LRRC37A3O60309 1634 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 TNS2Q63HR2 1409 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 SMG6Q86US8 1419 aaKnown RBP6.1□□□□□ -1.43
NUP54-206ENST00000508465 IL13P35225 146 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
NUP54-206ENST00000508465 RNF4P78317 190 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 VMACQ2NL98 169 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 SULT6B1Q6IMI4 303 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 BNC2Q6ZN30 1099 aaPredicted RBP6.1□□□□□ -1.43
NUP54-206ENST00000508465 MZB1Q8WU39 189 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 KIF2CQ99661 725 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 DUSP9Q99956 384 aaKnown RBP6.1□□□□□ -1.43
NUP54-206ENST00000508465 LUC7LQ9NQ29 371 aaKnown RBP6.1□□□□□ -1.43
NUP54-206ENST00000508465 IVNS1ABPQ9Y6Y0 642 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 MAP2P11137 1827 aaKnown RBP6.1□□□□□ -1.43
NUP54-206ENST00000508465 KIF20BQ96Q89 1820 aa6.1□□□□□ -1.43
NUP54-206ENST00000508465 ABCC6O95255 1503 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 TNS1Q9HBL0 1735 aaKnown RBP6.09□□□□□ -1.43
NUP54-206ENST00000508465 ZC3H12DA2A288 527 aaKnown RBP6.09□□□□□ -1.43
NUP54-206ENST00000508465 FAM221AA4D161 298 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 IRS4O14654 1257 aaPredicted RBP6.09□□□□□ -1.43
NUP54-206ENST00000508465 ZBTB7AO95365 584 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 HMOX1P09601 288 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 RTP1P59025 263 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 LMNB2Q03252 620 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 DDX10Q13206 875 aaKnown RBP6.09□□□□□ -1.43
NUP54-206ENST00000508465 CAMK2GQ13555 558 aaPredicted RBP6.09□□□□□ -1.43
NUP54-206ENST00000508465 GALNT18Q6P9A2 607 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 SMIM5Q71RC9 77 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 GGNQ86UU5 652 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 LINC00116Q8NCU8 138 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 PIGBQ92521 554 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 VWCEQ96DN2 955 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 TCTN2Q96GX1 697 aa6.09□□□□□ -1.43
NUP54-206ENST00000508465 TEPSINQ96N21 525 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms