RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 RNPC3Q96LT9 517 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SRPK1Q96SB4 655 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SPATA16Q9BXB7 569 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SPECC1L-ADORA2AF8WAN1 911 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 IKBKBO14920 756 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 IDH3BO43837 385 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 FBXO21O94952 628 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 ETV3P41162 512 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 GPC3P51654 580 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 ZNF131P52739 623 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 MCL1Q07820 350 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 HSPA14Q0VDF9 509 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 MAP3K12Q12852 859 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 ITIH4Q14624 930 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 CAMK4Q16566 473 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 GSTA3Q16772 222 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SHROOM1Q2M3G4 852 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 RABL6Q3YEC7 729 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 FAM209AQ5JX71 171 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 FKBP15Q5T1M5 1219 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SYCP2LQ5T4T6 812 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 GKAP1Q5VSY0 366 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 RNF220Q5VTB9 566 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 LVRNQ6Q4G3 990 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 PHLDB2Q86SQ0 1253 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 LILRB1Q8NHL6 650 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 CAVIN3Q969G5 261 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 PANX2Q96RD6 677 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 RPS6KC1Q96S38 1066 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SEMA4AQ9H3S1 761 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 EPB41L1Q9H4G0 881 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 PFDN4Q9NQP4 134 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 TYW1Q9NV66 732 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 IL1RAPL1Q9NZN1 696 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 LRCH1Q9Y2L9 728 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SNX9Q9Y5X1 595 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 JCADQ9P266 1359 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 KDM4FA0A1W2PPD8 638 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 CTAGE9A4FU28 777 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 GMNCA6NCL1 334 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 HNRNPRO43390 633 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 TRAPPC3O43617 180 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 RHOXF2BP0C7M4 288 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 CYP2C9P11712 490 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 ATP8B2P98198 1209 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 AMPD2Q01433 879 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 CNPY1Q3B7I2 92 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 TTMPQ5BVD1 217 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 FRS2Q8WU20 508 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 USP6NLQ92738 828 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 PMM1Q92871 262 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 SEC16BQ96JE7 1060 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 SPOCK3Q9BQ16 436 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 RHOXF2Q9BQY4 288 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 SIKE1Q9BRV8 207 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 OSBPL3Q9H4L5 887 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 PANK4Q9NVE7 773 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 DIS3Q9Y2L1 958 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 LEMD3Q9Y2U8 911 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 CHMP3Q9Y3E7 222 aa11.81□□□□□ -0.52
PDLIM5-210ENST00000508216 CARMIL1Q5VZK9 1371 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 CCT8L1PA6NM43 557 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 MAP3K7O43318 606 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 CBFA2T3O75081 653 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 TACC1O75410 805 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 GNA14O95837 355 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 TBX2Q13207 712 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 C11orf96Q7Z7L8 435 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 HAUS1Q96CS2 278 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 C8orf48Q96LL4 319 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 OLFM3Q96PB7 478 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 TESK2Q96S53 571 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 LRRC27Q9C0I9 530 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 TIMMDC1Q9NPL8 285 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 EURLQ9NYK6 297 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 DSEQ9UL01 958 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 RPL26L1Q9UNX3 145 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 MYH15Q9Y2K3 1946 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 PNPLA6Q8IY17 1366 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 ABCC12Q96J65 1359 aa11.8□□□□□ -0.52
PDLIM5-210ENST00000508216 GOLGA8TH3BQL2 631 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 KMOO15229 486 aa11.79□□□□□ -0.52
PDLIM5-210ENST00000508216 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms