RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 CLTBP09497 229 aa16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 CCND2P30279 289 aa16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 PSMC6P62333 389 aa16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 BRDTQ58F21 947 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 VSIG10LQ86VR7 867 aa16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 TRIM43Q96BQ3 446 aaPredicted RBP16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 UPF3BQ9BZI7 483 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 UBE2OQ9C0C9 1292 aaKnown RBP16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 TMEM39AQ9NV64 488 aa16.29■□□□□ 0.2
CCHCR1-222ENST00000507459 RANBP2P49792 3224 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 SORBS3O60504 671 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 GH1P01241 217 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 CDK7P50613 346 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 RCAN1P53805 252 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 FAAP100Q0VG06 881 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 FUT2Q10981 343 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 ITGA7Q13683 1181 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 UBE2SQ16763 222 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 ANKRD33Q7Z3H0 272 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 TOX2Q96NM4 488 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 LARP6Q9BRS8 491 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 POLR3EQ9NVU0 708 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 RTEL1Q9NZ71 1219 aa16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-222ENST00000507459 MROH7Q68CQ1 1323 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 PIK3CDO00329 1044 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 RGS20O76081 388 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 BMP8BP34820 402 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 NAPAP54920 295 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 CCT2P78371 535 aaKnown RBP16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 FBXL16Q8N461 479 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 AFG1LQ8WV93 481 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 BADQ92934 168 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 AGXT2Q9BYV1 514 aa16.27■□□□□ 0.2
CCHCR1-222ENST00000507459 KIAA1217Q5T5P2 1943 aa16.27■□□□□ 0.19
CCHCR1-222ENST00000507459 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 A6NJR5 290 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 PPFIA3O75145 1194 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 RAG1P15918 1043 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 MRPS9P82933 396 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 PURAQ00577 322 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 ARHGAP1Q07960 439 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 DHX37Q8IY37 1157 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 PPP1R13LQ8WUF5 828 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 MTG1Q9BT17 334 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 TM6SF1Q9BZW5 370 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
CCHCR1-222ENST00000507459 SPDYE3A6NKU9 549 aa16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 KPNA6O60684 536 aa16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 ITGB8P26012 769 aa16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 TYW1BQ6NUM6 668 aa16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 KCNV1Q6PIU1 500 aa16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 NCOA5Q9HCD5 579 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-222ENST00000507459 FRMPD4Q14CM0 1322 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 SMCO2A6NFE2 343 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 STXBP3O00186 592 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 KIAA0355O15063 1070 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 GGPS1O95749 300 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 MMP3P08254 477 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 SP2Q02086 613 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 LAMC2Q13753 1193 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 GNPTABQ3T906 1256 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 FAM47CQ5HY64 1035 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 TDHQ8IZJ6 230 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 SLC43A3Q8NBI5 491 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 PHKBQ93100 1093 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 BARHL2Q9NY43 387 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 PCDHA6Q9UN73 950 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 PCDHA8Q9Y5H6 950 aa16.24■□□□□ 0.19
CCHCR1-222ENST00000507459 A0A1W2PPC1 479 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 STAM2O75886 525 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 SEC24BO95487 1268 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 TGFB3P10600 412 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 SCG2P13521 617 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 UBA1P22314 1058 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 ADCY7P51828 1080 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 EVCP57679 992 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 STK3Q13188 491 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 NBPF20Q3BBV1 942 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 CELF3Q5SZQ8 465 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 MYSM1Q5VVJ2 828 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 PCNX4Q63HM2 1172 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 PPP1R18Q6NYC8 613 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 PGBD1Q96JS3 809 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 SLC26A6Q9BXS9 759 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 RIC8AQ9NPQ8 531 aa16.23■□□□□ 0.19
CCHCR1-222ENST00000507459 TBX21Q9UL17 535 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms