RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 A0A1W2PQ45 241 aaPredicted RBP9.33□□□□□ -0.92
SCN1A-207ENST00000507401 A0A1W2PQY0 241 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 SGSM2O43147 1006 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 TLE2Q04725 743 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 TRIM60Q495X7 471 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 HS1BP3Q53T59 392 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 TAPT1Q6NXT6 567 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 RNF207Q6ZRF8 634 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 RASGRP2Q7LDG7 609 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 DNERQ8NFT8 737 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 CLEC4DQ8WXI8 215 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 MAP4K1Q92918 833 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 GLT1D1Q96MS3 346 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 MPHOSPH6Q99547 160 aaKnown RBP9.33□□□□□ -0.92
SCN1A-207ENST00000507401 IL25Q9H293 177 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 VTA1Q9NP79 307 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 STARD7Q9NQZ5 370 aa9.33□□□□□ -0.92
SCN1A-207ENST00000507401 GNEQ9Y223 722 aaKnown RBP9.33□□□□□ -0.92
SCN1A-207ENST00000507401 MCM3APO60318 1980 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 RBM47A0AV96 593 aaKnown RBP9.32□□□□□ -0.92
SCN1A-207ENST00000507401 DCDC2CA8MYV0 355 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 NFIBO00712 420 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 KIAA0355O15063 1070 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 CTAGE5O15320 804 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 CABYRO75952 493 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 ASGR1P07306 291 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 CYP21A2P08686 494 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
SCN1A-207ENST00000507401 C6orf222P0C671 652 aaPredicted RBP9.32□□□□□ -0.92
SCN1A-207ENST00000507401 GOLGA8HP0CJ92 632 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 CDK7P50613 346 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
SCN1A-207ENST00000507401 PTH1RQ03431 593 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 SEC23AQ15436 765 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 KMT5BQ4FZB7 885 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 IFIT1BQ5T764 474 aaKnown RBP9.32□□□□□ -0.92
SCN1A-207ENST00000507401 MTA3Q9BTC8 594 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 UBA5Q9GZZ9 404 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 AP5M1Q9H0R1 490 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 RRAGDQ9NQL2 400 aaPredicted RBP9.32□□□□□ -0.92
SCN1A-207ENST00000507401 SZT2Q5T011 3432 aa9.32□□□□□ -0.92
SCN1A-207ENST00000507401 ASTN1O14525 1302 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 ABCB11O95342 1321 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 MROH7Q68CQ1 1323 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 PTPDC1A2A3K4 754 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 TRIM43BA6NCK2 446 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 ESPNB1AK53 854 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 ADCY6O43306 1168 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 TLL1O43897 1013 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 ZEB2O60315 1214 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 CLTBP09497 229 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 SMPD1P17405 629 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 ALDH5A1P51649 535 aaPredicted RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 RPS6P62753 249 aaKnown RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 TRAF1Q13077 416 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 DUSP28Q4G0W2 176 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 KIAA1211Q6ZU35 1233 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 MCF2L2Q86YR7 1114 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 ADGRF4Q8IZF3 695 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 SAMD3Q8N6K7 520 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 NCOA7Q8NI08 942 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 TRIM43Q96BQ3 446 aaPredicted RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 LENG1Q96BZ8 264 aaPredicted RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 TRIM44Q96DX7 344 aaPredicted RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 JMJD4Q9H9V9 463 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 PDLIM7Q9NR12 457 aa9.31□□□□□ -0.92
SCN1A-207ENST00000507401 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 MAP3K20Q9NYL2 800 aaKnown RBP9.31□□□□□ -0.92
SCN1A-207ENST00000507401 A0A0U1RQG5 324 aaPredicted RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 ERICH2A1L162 156 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 MYADML2A6NDP7 307 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 KLRF2D3W0D1 207 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 E7EWF7 191 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 ARVCFO00192 962 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 SOX1O00570 391 aaPredicted RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 NKRFO15226 690 aaKnown RBP eCLIP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 DYNC1LI2O43237 492 aaPredicted RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 EDNRBP24530 442 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 CALML3P27482 149 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 SART3Q15020 963 aaKnown RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 CDC37Q16543 378 aaPredicted RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 FSCN1Q16658 493 aaKnown RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 NOL8Q76FK4 1167 aaKnown RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 CYB5R4Q7L1T6 521 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 SH3RF1Q7Z6J0 888 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 RALYLQ86SE5 291 aaKnown RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 FBXO11Q86XK2 927 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 SLC43A3Q8NBI5 491 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 ANP32BQ92688 251 aaKnown RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 BADQ92934 168 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 MTMR8Q96EF0 704 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 PURBQ96QR8 312 aaKnown RBP9.3□□□□□ -0.92
SCN1A-207ENST00000507401 MAP3K14Q99558 947 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 AMNQ9BXJ7 453 aa9.3□□□□□ -0.92
SCN1A-207ENST00000507401 WDR11Q9BZH6 1224 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms