RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 MRPL18Q9H0U6 180 aaKnown RBP8.49□□□□□ -1.05
NR1I3-224ENST00000507215 PPP4R2Q9NY27 417 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 FAM8A1Q9UBU6 413 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 FAM205AQ6ZU69 1335 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 OTOFQ9HC10 1997 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 LOC100289279A0A1B0GTE1 492 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 CLRN2A0PK11 232 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 IGKV5-2P06315 115 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 XRCC5P13010 732 aaKnown RBP8.48□□□□□ -1.05
NR1I3-224ENST00000507215 ZNF16P17020 682 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-224ENST00000507215 EIF4BP23588 611 aaKnown RBP8.48□□□□□ -1.05
NR1I3-224ENST00000507215 GSTT1P30711 240 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 ARL4DP49703 201 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 IFIT5Q13325 482 aaKnown RBP8.48□□□□□ -1.05
NR1I3-224ENST00000507215 VGLL4Q14135 290 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 DUOXA2Q1HG44 320 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 FKBP1CQ5VVH2 108 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 DCAF15Q66K64 600 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-224ENST00000507215 CERS5Q8N5B7 392 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 PRMT6Q96LA8 375 aaPredicted RBP8.48□□□□□ -1.05
NR1I3-224ENST00000507215 FRMD6Q96NE9 622 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 TMOD2Q9NZR1 351 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 CACNA1FO60840 1977 aa8.48□□□□□ -1.05
NR1I3-224ENST00000507215 GRK4P32298 578 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 NRG1Q02297 640 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-224ENST00000507215 PSMD2Q13200 908 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 PPIL2Q13356 520 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 GCKRQ14397 625 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 MFSD14BQ5SR56 506 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 ACAD11Q709F0 780 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 UBE2Q1Q7Z7E8 422 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 FAM83AQ86UY5 434 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 FAM43AQ8N2R8 423 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 LINS1Q8NG48 757 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 RAET1EQ8TD07 263 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 TBC1D22AQ8WUA7 517 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 MEGF10Q96KG7 1140 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 SSBP4Q9BWG4 385 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-224ENST00000507215 MRIQ9BWK5 157 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 USP26Q9BXU7 913 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 PRO3102Q9H379 93 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 AKTIPQ9H8T0 292 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 ZNF70Q9UC06 446 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-224ENST00000507215 SRRDQ9UH36 339 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 MAST3O60307 1309 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 IRS2Q9Y4H2 1338 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 RPAP1Q9BWH6 1393 aaPredicted RBP8.47□□□□□ -1.05
NR1I3-224ENST00000507215 COL6A3P12111 3177 aa8.47□□□□□ -1.05
NR1I3-224ENST00000507215 ARAP2Q8WZ64 1704 aa8.46□□□□□ -1.05
NR1I3-224ENST00000507215 WTIPA6NIX2 430 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-224ENST00000507215 F8W031 263 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-224ENST00000507215 PAGE1O75459 146 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 KLRK1P26718 216 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 MAOBP27338 520 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 GATA4P43694 442 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 PPATQ06203 517 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 UBE4AQ14139 1066 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 MEI1Q5TIA1 1274 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 ANKRD23Q86SG2 305 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 DZIP1LQ8IYY4 767 aaKnown RBP8.46□□□□□ -1.06
NR1I3-224ENST00000507215 SH3TC2Q8TF17 1288 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 TEPSINQ96N21 525 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 NECAB3Q96P71 396 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-224ENST00000507215 GPN3Q9UHW5 284 aaPredicted RBP8.46□□□□□ -1.06
NR1I3-224ENST00000507215 TTF2Q9UNY4 1162 aaKnown RBP8.46□□□□□ -1.06
NR1I3-224ENST00000507215 FZD1Q9UP38 647 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 SUGT1Q9Y2Z0 365 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 RIPOR2Q9Y4F9 1068 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 LAMA3Q16787 3333 aa8.46□□□□□ -1.06
NR1I3-224ENST00000507215 BTBD19C9JJ37 291 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 ENC1O14682 589 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 FARP2O94887 1054 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-224ENST00000507215 PSMC4P43686 418 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 CCDC57Q2TAC2 916 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 CWF19L2Q2TBE0 894 aaKnown RBP8.45□□□□□ -1.06
NR1I3-224ENST00000507215 TAF7LQ5H9L4 462 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 RASIP1Q5U651 963 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 C17orf99Q6UX52 265 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 Q6ZS46 218 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 TDRD7Q8NHU6 1098 aaKnown RBP8.45□□□□□ -1.06
NR1I3-224ENST00000507215 JARID2Q92833 1246 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-224ENST00000507215 SHISA4Q96DD7 197 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 UBL7Q96S82 380 aaPredicted RBP8.45□□□□□ -1.06
NR1I3-224ENST00000507215 PARK7Q99497 189 aaKnown RBP8.45□□□□□ -1.06
NR1I3-224ENST00000507215 RNF208Q9H0X6 261 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 TMEM39AQ9NV64 488 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 MYPNQ86TC9 1320 aa8.45□□□□□ -1.06
NR1I3-224ENST00000507215 ELL2O00472 640 aaPredicted RBP8.44□□□□□ -1.06
NR1I3-224ENST00000507215 MSTNO14793 375 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 CCL5P13501 91 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 HIBADHP31937 336 aaKnown RBP8.44□□□□□ -1.06
NR1I3-224ENST00000507215 BMP8BP34820 402 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 CRKP46108 304 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 CASP7P55210 303 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 FGD1P98174 961 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 POU4F3Q15319 338 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 LDHAL6AQ6ZMR3 332 aa8.44□□□□□ -1.06
NR1I3-224ENST00000507215 PDZD3Q86UT5 571 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms