RNA–Protein interactions for RNA: ENST00000507096.1

CCDC149-205, Transcript of coiled-coil domain containing 149, humanhuman

TSL 3

Gene CCDC149, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-205ENST00000507096 PIK3CDO00329 1044 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
CCDC149-205ENST00000507096 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
CCDC149-205ENST00000507096 CCND2P30279 289 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 RCAN1P53805 252 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 SHHQ15465 462 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 LY6KQ17RY6 165 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 MFSD5Q6N075 450 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 KCNV1Q6PIU1 500 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 RAB11FIP4Q86YS3 637 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 IL31RAQ8NI17 732 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 RBM28Q9NW13 759 aaKnown RBP16.18■□□□□ 0.18
CCDC149-205ENST00000507096 DDX41Q9UJV9 622 aaKnown RBP16.18■□□□□ 0.18
CCDC149-205ENST00000507096 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
CCDC149-205ENST00000507096 ZBTB43O43298 467 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 STAM2O75886 525 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 RGS20O76081 388 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 C9orf50Q5SZB4 431 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 CMTR1Q8N1G2 835 aaKnown RBP16.17■□□□□ 0.18
CCDC149-205ENST00000507096 AFG1LQ8WV93 481 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 CUL5Q93034 780 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 ALDH8A1Q9H2A2 487 aaPredicted RBP16.17■□□□□ 0.18
CCDC149-205ENST00000507096 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
CCDC149-205ENST00000507096 LAMA3Q16787 3333 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 B4GALT4O60513 344 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 MMP3P08254 477 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 TGFB3P10600 412 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 EPHB4P54760 987 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
CCDC149-205ENST00000507096 PPIGQ13427 754 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCDC149-205ENST00000507096 LAMC2Q13753 1193 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 RTN1Q16799 776 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 NFRKBQ6P4R8 1299 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 TMEM199Q8N511 208 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 TRPV6Q9H1D0 765 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 HIPK3Q9H422 1215 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
CCDC149-205ENST00000507096 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 MEIS2O14770 477 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
CCDC149-205ENST00000507096 FGD1P98174 961 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 NBPF20Q3BBV1 942 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 XRRA1Q6P2D8 792 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 JAKMIP1Q96N16 626 aaKnown RBP16.15■□□□□ 0.18
CCDC149-205ENST00000507096 NOC4LQ9BVI4 516 aaKnown RBP16.15■□□□□ 0.18
CCDC149-205ENST00000507096 PPP1R12CQ9BZL4 782 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 PSTPIP2Q9H939 334 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 CNTNAP5Q8WYK1 1306 aa16.15■□□□□ 0.18
CCDC149-205ENST00000507096 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
CCDC149-205ENST00000507096 FUT2Q10981 343 aa16.14■□□□□ 0.17
CCDC149-205ENST00000507096 DGKDQ16760 1214 aa16.14■□□□□ 0.17
CCDC149-205ENST00000507096 GNPTABQ3T906 1256 aa16.14■□□□□ 0.17
CCDC149-205ENST00000507096 USP17L6PQ6QN14 398 aa16.14■□□□□ 0.17
CCDC149-205ENST00000507096 DHX37Q8IY37 1157 aaKnown RBP16.14■□□□□ 0.17
CCDC149-205ENST00000507096 FBXL16Q8N461 479 aa16.14■□□□□ 0.17
CCDC149-205ENST00000507096 CCDC82Q8N4S0 544 aa16.14■□□□□ 0.17
CCDC149-205ENST00000507096 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
CCDC149-205ENST00000507096 INPP4AQ96PE3 977 aaPredicted RBP16.14■□□□□ 0.17
CCDC149-205ENST00000507096 hCG_1642624A0A1W2PR95 340 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 GOLGA8AA7E2F4 631 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 HOXD8P13378 290 aaPredicted RBP16.13■□□□□ 0.17
CCDC149-205ENST00000507096 CSF2RAP15509 400 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 UBA1P22314 1058 aaKnown RBP16.13■□□□□ 0.17
CCDC149-205ENST00000507096 PSMA5P28066 241 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 ICAM3P32942 547 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 CYP2C18P33260 490 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 MRPS9P82933 396 aaKnown RBP16.13■□□□□ 0.17
CCDC149-205ENST00000507096 FAM47CQ5HY64 1035 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 CELF3Q5SZQ8 465 aaKnown RBP16.13■□□□□ 0.17
CCDC149-205ENST00000507096 MYSM1Q5VVJ2 828 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 PCNX4Q63HM2 1172 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 HEATR3Q7Z4Q2 680 aa16.13■□□□□ 0.17
CCDC149-205ENST00000507096 TRMT13Q9NUP7 481 aaKnown RBP16.13■□□□□ 0.17
CCDC149-205ENST00000507096 SZT2Q5T011 3432 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 MYH7BA7E2Y1 1941 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 CCDC196A0A1B0GTZ2 297 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 hCG_1984214I3L0E3 225 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 PPFIA4O75335 1185 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 GGPS1O95749 300 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 CPA1P15085 419 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 SMAD3P84022 425 aaKnown RBP16.12■□□□□ 0.17
CCDC149-205ENST00000507096 FAM109BQ6ICB4 259 aaPredicted RBP16.12■□□□□ 0.17
CCDC149-205ENST00000507096 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 PSRC1Q6PGN9 363 aaPredicted RBP16.12■□□□□ 0.17
CCDC149-205ENST00000507096 Q6ZUG5 572 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 SESTD1Q86VW0 696 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 ZNF713Q8N859 430 aaPredicted RBP16.12■□□□□ 0.17
CCDC149-205ENST00000507096 KAT2BQ92831 832 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 KATNAL1Q9BW62 490 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 AGXT2Q9BYV1 514 aa16.12■□□□□ 0.17
CCDC149-205ENST00000507096 FAM217BQ9NTX9 383 aaPredicted RBP16.12■□□□□ 0.17
CCDC149-205ENST00000507096 NID2Q14112 1375 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms