RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PTPRFP10586 1907 aa11.25□□□□□ -0.61
CLCN3-205ENST00000506924 GPR25O00155 361 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 CYP2C8P10632 490 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 MAPTP10636 758 aaKnown RBP11.24□□□□□ -0.61
CLCN3-205ENST00000506924 IDH3AP50213 366 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 BACE1P56817 501 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 ZNF211Q13398 564 aaPredicted RBP11.24□□□□□ -0.61
CLCN3-205ENST00000506924 FAM47AQ5JRC9 791 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 FASTKD5Q7L8L6 764 aaKnown RBP11.24□□□□□ -0.61
CLCN3-205ENST00000506924 ANKRD23Q86SG2 305 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 ZNF296Q8WUU4 475 aaPredicted RBP11.24□□□□□ -0.61
CLCN3-205ENST00000506924 WDR18Q9BV38 432 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 EFCC1Q9HA90 598 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 BRD7Q9NPI1 651 aa11.24□□□□□ -0.61
CLCN3-205ENST00000506924 A0A1W2PRG0 241 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 H3BRB1 525 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
CLCN3-205ENST00000506924 ERICH6BQ5W0A0 696 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 TMEM179Q6ZVK1 233 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 TICAM2Q86XR7 235 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 ZNF444Q8N0Y2 327 aaPredicted RBP11.23□□□□□ -0.61
CLCN3-205ENST00000506924 TUT1Q9H6E5 874 aaKnown RBP11.23□□□□□ -0.61
CLCN3-205ENST00000506924 ZFYVE28Q9HCC9 887 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 PRDM10Q9NQV6 1147 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 TOMM22Q9NS69 142 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 TMOD4Q9NZQ9 345 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 CPA4Q9UI42 421 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 ROBO3Q96MS0 1386 aa11.23□□□□□ -0.61
CLCN3-205ENST00000506924 KHNYNO15037 678 aaKnown RBP11.22□□□□□ -0.61
CLCN3-205ENST00000506924 RPLP1P05386 114 aaKnown RBP11.22□□□□□ -0.61
CLCN3-205ENST00000506924 SLC3A2P08195 630 aaKnown RBP11.22□□□□□ -0.61
CLCN3-205ENST00000506924 MPSTP25325 297 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 EIF1AXP47813 144 aaKnown RBP11.22□□□□□ -0.61
CLCN3-205ENST00000506924 PTH1RQ03431 593 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 ICA1Q05084 483 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 PDE4BQ07343 736 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 ALX1Q15699 326 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 RRP12Q5JTH9 1297 aaKnown RBP11.22□□□□□ -0.61
CLCN3-205ENST00000506924 SIAH1Q8IUQ4 282 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 RUFY2Q8WXA3 655 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 CHMP4CQ96CF2 233 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 MARK1Q9P0L2 795 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
CLCN3-205ENST00000506924 C19orf81C9J6K1 198 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 PEX10O60683 326 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 FKTNO75072 461 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 EEF2P13639 858 aaKnown RBP11.21□□□□□ -0.61
CLCN3-205ENST00000506924 FGFR3P22607 806 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 TFAP4Q01664 338 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 KIAA1755Q5JYT7 1200 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 SPICE1Q8N0Z3 855 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 CD99L2Q8TCZ2 262 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 ZNF775Q96BV0 537 aaPredicted RBP11.21□□□□□ -0.61
CLCN3-205ENST00000506924 ABHD17AQ96GS6 310 aa11.21□□□□□ -0.61
CLCN3-205ENST00000506924 LOC285556D6RIA3 1793 aa11.21□□□□□ -0.62
CLCN3-205ENST00000506924 DCDC2BA2VCK2 349 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 ZNF213O14771 459 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 OPLAHO14841 1288 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 SGSM2O43147 1006 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 RANBP6O60518 1105 aaKnown RBP11.2□□□□□ -0.62
CLCN3-205ENST00000506924 NMT2O60551 498 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 TLR2O60603 784 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 WFS1O76024 890 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 TSPY3P0CV98 308 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 TSPY8P0CW00 308 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 CAP1Q01518 475 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 MTMR3Q13615 1198 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 ECM1Q16610 540 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 FAM26DQ5JW98 314 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 TBC1D10CQ8IV04 446 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-205ENST00000506924 PIK3R5Q8WYR1 880 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 PARK7Q99497 189 aaKnown RBP11.2□□□□□ -0.62
CLCN3-205ENST00000506924 DSCC1Q9BVC3 393 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 KIAA1683Q9H0B3 1180 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
CLCN3-205ENST00000506924 KANSL2Q9H9L4 492 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 ZNF287Q9HBT7 754 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
CLCN3-205ENST00000506924 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLCN3-205ENST00000506924 ZSWIM8A7E2V4 1837 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 RAD50Q92878 1312 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 TSPY2A6NKD2 308 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 VCAM1P19320 739 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 IRX3P78415 501 aaPredicted RBP11.19□□□□□ -0.62
CLCN3-205ENST00000506924 SP3Q02447 781 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 C17orf99Q6UX52 265 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 ANKRD13CQ8N6S4 541 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 GPR161Q8N6U8 529 aaKnown RBP11.19□□□□□ -0.62
CLCN3-205ENST00000506924 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 P2RX7Q99572 595 aaKnown RBP11.19□□□□□ -0.62
CLCN3-205ENST00000506924 ARHGAP39Q9C0H5 1083 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 RPAP3Q9H6T3 665 aaPredicted RBP11.19□□□□□ -0.62
CLCN3-205ENST00000506924 ZCCHC17Q9NP64 241 aaKnown RBP11.19□□□□□ -0.62
CLCN3-205ENST00000506924 ANO2Q9NQ90 1003 aa11.19□□□□□ -0.62
CLCN3-205ENST00000506924 AVENQ9NQS1 362 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms