RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 HTTP42858 3142 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 MYH7BA7E2Y1 1941 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 STAM2O75886 525 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 RGS20O76081 388 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 MYCLP12524 364 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-210ENST00000506767 CCND3P30281 292 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-210ENST00000506767 ARHGAP4P98171 946 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 NR5A1Q13285 461 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 EARS2Q5JPH6 523 aaKnown RBP14.67□□□□□ -0.06
TCOF1-210ENST00000506767 LARP1BQ659C4 914 aaKnown RBP14.67□□□□□ -0.06
TCOF1-210ENST00000506767 KRT25Q7Z3Z0 450 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 FBXO16Q8IX29 292 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-210ENST00000506767 FOXP1Q9H334 677 aaPredicted RBP14.67□□□□□ -0.06
TCOF1-210ENST00000506767 BRMS1Q9HCU9 246 aa14.67□□□□□ -0.06
TCOF1-210ENST00000506767 PDCP20941 246 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 U2AF2P26368 475 aaKnown RBP eCLIP14.66□□□□□ -0.06
TCOF1-210ENST00000506767 NONOQ15233 471 aaKnown RBP eCLIP14.66□□□□□ -0.06
TCOF1-210ENST00000506767 MTFR1Q15390 333 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 SAFBQ15424 915 aaKnown RBP eCLIP14.66□□□□□ -0.06
TCOF1-210ENST00000506767 EEPD1Q7L9B9 569 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 TBCKQ8TEA7 893 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 INPP4AQ96PE3 977 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-210ENST00000506767 UNC93B1Q9H1C4 597 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 HMX1Q9NP08 348 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-210ENST00000506767 PAK6Q9NQU5 681 aaPredicted RBP14.66□□□□□ -0.06
TCOF1-210ENST00000506767 PDGFCQ9NRA1 345 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 TSHZ2Q9NRE2 1034 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 UBIAD1Q9Y5Z9 338 aa14.66□□□□□ -0.06
TCOF1-210ENST00000506767 CCDC194A0A1B0GVG4 234 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 SEPT4O43236 478 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 HSP90AA1P07900 732 aaKnown RBP14.65□□□□□ -0.06
TCOF1-210ENST00000506767 CCL5P13501 91 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 ITGB5P18084 799 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 SYT1P21579 422 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 ICAM3P32942 547 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 CIITAP33076 1130 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 USP11P51784 963 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 CCDC144BQ3MJ40 725 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 IQSEC1Q6DN90 963 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 PIK3AP1Q6ZUJ8 805 aa14.65□□□□□ -0.06
TCOF1-210ENST00000506767 ZFP91Q96JP5 570 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-210ENST00000506767 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.65□□□□□ -0.06
TCOF1-210ENST00000506767 ZHX1Q9UKY1 873 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-210ENST00000506767 FAM205CA6NFA0 338 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 KIF28PB7ZC32 967 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 H3BQV1 296 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 ADCY6O43306 1168 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 AKR1A1P14550 325 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 ADCYAP1R1P41586 468 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 INF2Q27J81 1249 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 LHX8Q68G74 356 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 CCDC62Q6P9F0 684 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 SPRYD3Q8NCJ5 442 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 MXRA8Q9BRK3 442 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 RTEL1Q9NZ71 1219 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 FAM184BQ9ULE4 1060 aa14.64□□□□□ -0.07
TCOF1-210ENST00000506767 IGLV3-22A0A075B6J6 115 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 CYP3A7-CYP3A51PA0A087WV96 503 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-210ENST00000506767 SPATA31C2B4DYI2 1134 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 FAM86B1E9PN63 330 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 MEIS1O00470 390 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 MAFGO15525 162 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 FAM86B2P0C5J1 330 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 TGFB3P10600 412 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 CYP3A7P24462 503 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 CNGA1P29973 690 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 SEMA3FQ13275 785 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 CEP55Q53EZ4 464 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 TMEM63BQ5T3F8 832 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 KCNV1Q6PIU1 500 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 MOXD1Q6UVY6 613 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 SEPT14Q6ZU15 432 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 NIPA1Q7RTP0 329 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 NLRX1Q86UT6 975 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 CYP2W1Q8TAV3 490 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 SCFD2Q8WU76 684 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 GPRASP2Q96D09 838 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 MBOAT7Q96N66 472 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 WDR11Q9BZH6 1224 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 RNF208Q9H0X6 261 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 JADE2Q9NQC1 790 aa14.63□□□□□ -0.07
TCOF1-210ENST00000506767 DDX20Q9UHI6 824 aaKnown RBP14.63□□□□□ -0.07
TCOF1-210ENST00000506767 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
TCOF1-210ENST00000506767 GNEQ9Y223 722 aaKnown RBP14.63□□□□□ -0.07
TCOF1-210ENST00000506767 FRMPD3Q5JV73 1810 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 FIBPO43427 364 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 STX6O43752 255 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 MSCO60682 206 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 ARIH2O95376 493 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 PDIA4P13667 645 aaKnown RBP14.62□□□□□ -0.07
TCOF1-210ENST00000506767 SMPD1P17405 629 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 TNFAIP2Q03169 654 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 TTLL4Q14679 1199 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 GNPTABQ3T906 1256 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 DUSP28Q4G0W2 176 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 LENG9Q96B70 501 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 MTMR6Q9Y217 621 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms