RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PKN3Q6P5Z2 889 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 GALNT18Q6P9A2 607 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 DDX53Q86TM3 631 aaKnown RBP8.31□□□□□ -1.08
HERC4-213ENST00000506515 IGSF22Q8N9C0 903 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 NUP43Q8NFH3 380 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 WNK4Q96J92 1243 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 FAM126AQ9BYI3 521 aaPredicted RBP8.31□□□□□ -1.08
HERC4-213ENST00000506515 BRINP2Q9C0B6 783 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 MTFR1LQ9H019 292 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 C19orf44Q9H6X5 657 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 MBNL3Q9NUK0 354 aaKnown RBP8.31□□□□□ -1.08
HERC4-213ENST00000506515 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 C22orf46C9J442 243 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 NRDCO43847 1150 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 RNASE1P07998 156 aaKnown RBP8.3□□□□□ -1.08
HERC4-213ENST00000506515 PYGMP11217 842 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 HSP90B1P14625 803 aaKnown RBP8.3□□□□□ -1.08
HERC4-213ENST00000506515 PRKCAP17252 672 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 POU3F2P20265 443 aaPredicted RBP8.3□□□□□ -1.08
HERC4-213ENST00000506515 TRHRP34981 398 aaPredicted RBP8.3□□□□□ -1.08
HERC4-213ENST00000506515 ST5P78524 1137 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 LZTR1Q8N653 840 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 FBXW5Q969U6 566 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 ASIC4Q96FT7 647 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
HERC4-213ENST00000506515 A0A1W2PQJ5 194 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 CCDC66A2RUB6 948 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 NOTOA8MTQ0 251 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 H7BY64 318 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 PSPNO60542 156 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 CKMP06732 381 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 MSL3P1P0C860 447 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 GDNFP39905 211 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 NFKB2Q00653 900 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 MVKQ03426 396 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 ZNF792Q3KQV3 632 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 TIGD5Q53EQ6 642 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 FAM47CQ5HY64 1035 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 DDX46Q7L014 1031 aaKnown RBP8.29□□□□□ -1.08
HERC4-213ENST00000506515 NLGN2Q8NFZ4 835 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 CATSPERZQ9NTU4 200 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
HERC4-213ENST00000506515 GPR160Q9UJ42 338 aa8.29□□□□□ -1.08
HERC4-213ENST00000506515 M0R2C6 588 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 GLRX3O76003 335 aaKnown RBP8.28□□□□□ -1.08
HERC4-213ENST00000506515 EFEMP2O95967 443 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 HPXP02790 462 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 GALK1P51570 392 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 CORO7P57737 925 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 SEPT7Q16181 437 aaKnown RBP8.28□□□□□ -1.08
HERC4-213ENST00000506515 STRA8Q7Z7C7 330 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 SIRT2Q8IXJ6 389 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 PLEKHO2Q8TD55 490 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 MTA3Q9BTC8 594 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 RC3H2Q9HBD1 1191 aaKnown RBP8.28□□□□□ -1.08
HERC4-213ENST00000506515 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 FBLN5Q9UBX5 448 aa8.28□□□□□ -1.08
HERC4-213ENST00000506515 COA3Q9Y2R0 106 aaPredicted RBP8.28□□□□□ -1.08
HERC4-213ENST00000506515 GSTA4O15217 222 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 HYAL3O43820 417 aaPredicted RBP8.27□□□□□ -1.09
HERC4-213ENST00000506515 HMGB1P09429 215 aaKnown RBP8.27□□□□□ -1.09
HERC4-213ENST00000506515 RAC2P15153 192 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 STRN3Q13033 797 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 LRP8Q14114 963 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 NR0B2Q15466 257 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 CISD2Q8N5K1 135 aaKnown RBP8.27□□□□□ -1.09
HERC4-213ENST00000506515 MYLIPQ8WY64 445 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 CELF4Q9BZC1 486 aaKnown RBP8.27□□□□□ -1.09
HERC4-213ENST00000506515 SP110Q9HB58 689 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 ACSL6Q9UKU0 697 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 CTNND2Q9UQB3 1225 aa8.27□□□□□ -1.09
HERC4-213ENST00000506515 SCO2A0A1W2PP80 73 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 WNT9AO14904 365 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 NPTXRO95502 500 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 GNAT1P11488 350 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 COL6A2P12110 1019 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 POU3F3P20264 500 aaPredicted RBP8.26□□□□□ -1.09
HERC4-213ENST00000506515 CYP4F8P98187 520 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 SKOR2Q2VWA4 1001 aaPredicted RBP8.26□□□□□ -1.09
HERC4-213ENST00000506515 TMEM177Q53S58 311 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 BICRALQ6AI39 1079 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 C16orf59Q7L2K0 433 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 Q8N1Y9 231 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 ADGRE2Q9UHX3 823 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 CBLCQ9ULV8 474 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 ATP8A1Q9Y2Q0 1164 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 X6R8D5 127 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 CECR2Q9BXF3 1484 aa8.26□□□□□ -1.09
HERC4-213ENST00000506515 DGKIO75912 1065 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 NTRK1P04629 796 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 CRY1Q16526 586 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 DDX42Q86XP3 938 aaKnown RBP eCLIP8.25□□□□□ -1.09
HERC4-213ENST00000506515 NXPE1Q8N323 547 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 AFAP1L2Q8N4X5 818 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 ATL2Q8NHH9 583 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 EPB41L1Q9H4G0 881 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.25□□□□□ -1.09
HERC4-213ENST00000506515 CABP5Q9NP86 173 aa8.25□□□□□ -1.09
HERC4-213ENST00000506515 ZNF891A8MT65 544 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms