RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SNX17Q15036 470 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 LY6KQ17RY6 165 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 SCG2P13521 617 aa20.52■□□□□ 0.87
SMN1-204ENST00000506163 NAPAP54920 295 aa20.52■□□□□ 0.87
SMN1-204ENST00000506163 SCRN1Q12765 414 aa20.52■□□□□ 0.87
SMN1-204ENST00000506163 FSCN1Q16658 493 aaKnown RBP20.52■□□□□ 0.87
SMN1-204ENST00000506163 CUL5Q93034 780 aa20.52■□□□□ 0.87
SMN1-204ENST00000506163 AP5M1Q9H0R1 490 aa20.52■□□□□ 0.87
SMN1-204ENST00000506163 SPC25Q9HBM1 224 aa20.52■□□□□ 0.87
SMN1-204ENST00000506163 RIC8AQ9NPQ8 531 aa20.52■□□□□ 0.87
SMN1-204ENST00000506163 DDX41Q9UJV9 622 aaKnown RBP20.52■□□□□ 0.87
SMN1-204ENST00000506163 MOXD2PA6NHM9 499 aa20.51■□□□□ 0.87
SMN1-204ENST00000506163 NEK4P51957 841 aa20.51■□□□□ 0.87
SMN1-204ENST00000506163 RTP1P59025 263 aa20.51■□□□□ 0.87
SMN1-204ENST00000506163 TTLL4Q14679 1199 aa20.51■□□□□ 0.87
SMN1-204ENST00000506163 SLC26A6Q9BXS9 759 aa20.51■□□□□ 0.87
SMN1-204ENST00000506163 SMCO2A6NFE2 343 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 LARGE1O95461 756 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 CCND2P30279 289 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 SP2Q02086 613 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 TRIM60Q495X7 471 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 C1orf53Q5VUE5 145 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 CXCL17Q6UXB2 119 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 PCSK9Q8NBP7 692 aaKnown RBP20.5■□□□□ 0.87
SMN1-204ENST00000506163 OR6J1Q8NGC5 347 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 RNF26Q9BY78 433 aaPredicted RBP20.5■□□□□ 0.87
SMN1-204ENST00000506163 BCAS3Q9H6U6 928 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 RTEL1Q9NZ71 1219 aa20.5■□□□□ 0.87
SMN1-204ENST00000506163 ZMYND8Q9ULU4 1186 aaPredicted RBP20.5■□□□□ 0.87
SMN1-204ENST00000506163 GRIN2DO15399 1336 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 PFKFB2O60825 505 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 ARHGAP1Q07960 439 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 SEMA3FQ13275 785 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 ME3Q16798 604 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 PPP1R18Q6NYC8 613 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 TMEM260Q9NX78 707 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 PCDHA6Q9UN73 950 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 PCDHA8Q9Y5H6 950 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 NR2E3Q9Y5X4 410 aa20.49■□□□□ 0.87
SMN1-204ENST00000506163 hCG_1984214I3L0E3 225 aa20.48■□□□□ 0.87
SMN1-204ENST00000506163 NKRFO15226 690 aaKnown RBP eCLIP20.48■□□□□ 0.87
SMN1-204ENST00000506163 SYN1P17600 705 aa20.48■□□□□ 0.87
SMN1-204ENST00000506163 CLK2P49760 499 aaKnown RBP20.48■□□□□ 0.87
SMN1-204ENST00000506163 PCNX4Q63HM2 1172 aa20.48■□□□□ 0.87
SMN1-204ENST00000506163 ZNF713Q8N859 430 aaPredicted RBP20.48■□□□□ 0.87
SMN1-204ENST00000506163 PGBD1Q96JS3 809 aa20.48■□□□□ 0.87
SMN1-204ENST00000506163 INPP4AQ96PE3 977 aaPredicted RBP20.48■□□□□ 0.87
SMN1-204ENST00000506163 C22orf23Q9BZE7 217 aa20.48■□□□□ 0.87
SMN1-204ENST00000506163 STARD7Q9NQZ5 370 aa20.48■□□□□ 0.87
SMN1-204ENST00000506163 ATP11BQ9Y2G3 1177 aa20.48■□□□□ 0.87
SMN1-204ENST00000506163 A6NJR5 290 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 CTDNEP1O95476 244 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 RBM25P49756 843 aaKnown RBP20.47■□□□□ 0.87
SMN1-204ENST00000506163 CDK7P50613 346 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 ADCY7P51828 1080 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 TLE2Q04725 743 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 NECAB1Q8N987 351 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 AFG1LQ8WV93 481 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 AIFM3Q96NN9 605 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 ZMYND12Q9H0C1 365 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 SLKQ9H2G2 1235 aaPredicted RBP20.47■□□□□ 0.87
SMN1-204ENST00000506163 MRVI1Q9Y6F6 885 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 ELP1O95163 1332 aa20.47■□□□□ 0.87
SMN1-204ENST00000506163 PSMC6P62333 389 aa20.46■□□□□ 0.87
SMN1-204ENST00000506163 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
SMN1-204ENST00000506163 SH3RF1Q7Z6J0 888 aa20.46■□□□□ 0.87
SMN1-204ENST00000506163 GLT1D1Q96MS3 346 aa20.46■□□□□ 0.87
SMN1-204ENST00000506163 VPS54Q9P1Q0 977 aa20.46■□□□□ 0.87
SMN1-204ENST00000506163 RBM27Q9P2N5 1060 aaKnown RBP20.46■□□□□ 0.87
SMN1-204ENST00000506163 MYH7BA7E2Y1 1941 aa20.46■□□□□ 0.87
SMN1-204ENST00000506163 ESYT2A0FGR8 921 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 SPATA31C2B4DYI2 1134 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 CPLX1O14810 134 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 SORBS3O60504 671 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 GH1P01241 217 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 ITGB5P18084 799 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 UBA1P22314 1058 aaKnown RBP20.45■□□□□ 0.86
SMN1-204ENST00000506163 ICAM3P32942 547 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 PURAQ00577 322 aaKnown RBP20.45■□□□□ 0.86
SMN1-204ENST00000506163 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
SMN1-204ENST00000506163 ST3GAL1Q11201 340 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 ANKRD1Q15327 319 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 TELO2Q9Y4R8 837 aa20.45■□□□□ 0.86
SMN1-204ENST00000506163 RANBP2P49792 3224 aaKnown RBP20.45■□□□□ 0.86
SMN1-204ENST00000506163 SPDYE3A6NKU9 549 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 CELF3Q5SZQ8 465 aaKnown RBP20.44■□□□□ 0.86
SMN1-204ENST00000506163 MYSM1Q5VVJ2 828 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 JAKMIP3Q5VZ66 844 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 XRRA1Q6P2D8 792 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 SLC43A3Q8NBI5 491 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 PPP1R13LQ8WUF5 828 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 EMID1Q96A84 441 aaPredicted RBP20.44■□□□□ 0.86
SMN1-204ENST00000506163 VTI1AQ96AJ9 217 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 TRIM43BA6NCK2 446 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 ARVCFO00192 962 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 ZEB2O60315 1214 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 MYL3P08590 195 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 TGFB3P10600 412 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 CPT1AP50416 773 aa20.44■□□□□ 0.86
SMN1-204ENST00000506163 ANKRD33Q7Z3H0 272 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms