RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CLEC4DQ8WXI8 215 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 EMID1Q96A84 441 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-210ENST00000505589 CHMP4CQ96CF2 233 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 MRPL38Q96DV4 380 aaKnown RBP11.61□□□□□ -0.55
NEDD9-210ENST00000505589 MFSD14AQ96MC6 490 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 UIMC1Q96RL1 719 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 TMEM47Q9BQJ4 181 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 RNF41Q9H4P4 317 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-210ENST00000505589 MRPL11Q9Y3B7 192 aaKnown RBP11.61□□□□□ -0.55
NEDD9-210ENST00000505589 SCN10AQ9Y5Y9 1956 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 LGR5O75473 907 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 PDHBP11177 359 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 PTGS1P23219 599 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 TRAF1Q13077 416 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 PKN1Q16512 942 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 GDF6Q6KF10 455 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-210ENST00000505589 MFSD6Q6ZSS7 791 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 SEPT14Q6ZU15 432 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 DHX37Q8IY37 1157 aaKnown RBP11.6□□□□□ -0.55
NEDD9-210ENST00000505589 SAMD3Q8N6K7 520 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.6□□□□□ -0.55
NEDD9-210ENST00000505589 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 SEC62Q99442 399 aaKnown RBP11.6□□□□□ -0.55
NEDD9-210ENST00000505589 POP1Q99575 1024 aaKnown RBP11.6□□□□□ -0.55
NEDD9-210ENST00000505589 PRRX2Q99811 253 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 ABCB11O95342 1321 aa11.6□□□□□ -0.55
NEDD9-210ENST00000505589 DCXO43602 365 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 NMT2O60551 498 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 TGFB3P10600 412 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 GNAT1P11488 350 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 PSEN2P49810 448 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 MFAP1P55081 439 aaKnown RBP11.59□□□□□ -0.55
NEDD9-210ENST00000505589 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
NEDD9-210ENST00000505589 ARHGEF16Q5VV41 709 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 SLC30A10Q6XR72 485 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 DGKHQ86XP1 1220 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 GDPD5Q8WTR4 605 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 COPS5Q92905 334 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 PABPC5Q96DU9 382 aaKnown RBP11.59□□□□□ -0.55
NEDD9-210ENST00000505589 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 C11orf16Q9NQ32 467 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 HDAC6Q9UBN7 1215 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 DDX41Q9UJV9 622 aaKnown RBP11.59□□□□□ -0.55
NEDD9-210ENST00000505589 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 MTUS1Q9ULD2 1270 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 RWDD3Q9Y3V2 267 aa11.59□□□□□ -0.55
NEDD9-210ENST00000505589 DDX49Q9Y6V7 483 aaKnown RBP11.59□□□□□ -0.55
NEDD9-210ENST00000505589 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
NEDD9-210ENST00000505589 LCHNA4D1U4 455 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 RSPH10B2B2RC85 870 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 NBNO60934 754 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 CAND2O75155 1236 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 FGAP02671 866 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 RB1P06400 928 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 RSPH10BP0C881 870 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 SNHG28P0DPA3 235 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 HSPD1P10809 573 aaKnown RBP11.58□□□□□ -0.56
NEDD9-210ENST00000505589 LY6KQ17RY6 165 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 KIAA0753Q2KHM9 967 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 BANK1Q8NDB2 785 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 PPTC7Q8NI37 304 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 NEK9Q8TD19 979 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 ESR2Q92731 530 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 APBB2Q92870 758 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 MRVI1Q9Y6F6 885 aa11.58□□□□□ -0.56
NEDD9-210ENST00000505589 LRRC37A2A6NM11 1700 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 FAM86C2PA6NEL3 165 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 H3BNC9 293 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 ARHGEF15O94989 841 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 CENPBP07199 599 aaPredicted RBP11.57□□□□□ -0.56
NEDD9-210ENST00000505589 MX1P20591 662 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 MRE11P49959 708 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 DEFB103AP81534 67 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 HTRA4P83105 476 aaPredicted RBP11.57□□□□□ -0.56
NEDD9-210ENST00000505589 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 GPM6BQ13491 265 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 MFSD10Q14728 455 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 GPNMBQ14956 572 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 USH1GQ495M9 461 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 MCMDC2Q4G0Z9 681 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 MYOCDQ8IZQ8 938 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 PI4K2BQ8TCG2 481 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 SEPT8Q92599 483 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 KAT2BQ92831 832 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 TOP1MTQ969P6 601 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 PPP2R3CQ969Q6 453 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 YME1L1Q96TA2 773 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 ALG1Q9BT22 464 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 NSUN3Q9H649 340 aaKnown RBP11.57□□□□□ -0.56
NEDD9-210ENST00000505589 TRANK1O15050 2925 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 ZMYM6O95789 1325 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
NEDD9-210ENST00000505589 TRIP12Q14669 1992 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms