RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ITGAVP06756 1048 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 ETFBP38117 255 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 RTP5Q14D33 572 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 DENND5AQ6IQ26 1287 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 NLRP10Q86W26 655 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 FAM26EQ8N5C1 309 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 USP33Q8TEY7 942 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 DDX11Q96FC9 970 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 GORASP1Q9BQQ3 440 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 KIF27Q86VH2 1401 aa7.61□□□□□ -1.19
DEPDC1B-203ENST00000505017 KIF21BO75037 1637 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 NOBOXO60393 691 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 FPR2P25090 351 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 PRSS53Q2L4Q9 553 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 NT5DC1Q5TFE4 455 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 POMZP3Q6PJE2 187 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 ZNF227Q86WZ6 799 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 CARFQ8N187 725 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 LINC00482Q8N8I6 264 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 FGD5Q6ZNL6 1462 aa7.6□□□□□ -1.19
DEPDC1B-203ENST00000505017 URB2Q14146 1524 aaKnown RBP7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 ZBTB7AO95365 584 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 SMAD4Q13485 552 aaKnown RBP7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 ZFYVE27Q5T4F4 411 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 FERMT3Q86UX7 667 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 FAM178BQ8IXR5 827 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 Q8N1Y9 231 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 BTG4Q9NY30 223 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 NUDT5Q9UKK9 219 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 JAG2Q9Y219 1238 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 MRC2Q9UBG0 1479 aa7.59□□□□□ -1.19
DEPDC1B-203ENST00000505017 C22orf46C9J442 243 aa7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 SCG5P05408 212 aa7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 CELA3BP08861 270 aa7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 MIB1Q86YT6 1006 aa7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 FAM9AQ8IZU1 332 aaPredicted RBP7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 PPP1R14AQ96A00 147 aa7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 ZNF428Q96B54 188 aa7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 C1orf159Q96HA4 380 aa7.58□□□□□ -1.2
DEPDC1B-203ENST00000505017 ABCA10Q8WWZ4 1543 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 GOLGA3Q08378 1498 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 NOP56O00567 594 aaKnown RBP7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 SUSD5O60279 629 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 FGRP09769 529 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 LCP1P13796 627 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 LARP1BQ659C4 914 aaKnown RBP7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 PRRT2Q7Z6L0 340 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 ZNF761Q86XN6 746 aaPredicted RBP7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 ZBTB8AQ96BR9 441 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 ACTR10Q9NZ32 417 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 ERICH3Q5RHP9 1530 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 RUSC2Q8N2Y8 1516 aa7.57□□□□□ -1.2
DEPDC1B-203ENST00000505017 LOC105371045A0A1W2PR82 267 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 ERCC5P28715 1186 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 BCL6P41182 706 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 GRIA2P42262 883 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 EFEMP1Q12805 493 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 TESK1Q15569 626 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 STK32CQ86UX6 486 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 CRACR2BQ8N4Y2 399 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 RCBTB1Q8NDN9 531 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 C11orf84Q9BUA3 381 aaPredicted RBP7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 BDH2Q9BUT1 245 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 PRKAG3Q9UGI9 489 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 PALD1Q9ULE6 856 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 X6R8D5 127 aa7.56□□□□□ -1.2
DEPDC1B-203ENST00000505017 HOXC12P31275 282 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 ECI1P42126 302 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 SV2CQ496J9 727 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 GGNQ86UU5 652 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 DCP2Q8IU60 420 aaKnown RBP7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 TINF2Q9BSI4 451 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 LNPKQ9C0E8 428 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 ZNF408Q9H9D4 720 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 CAPN10Q9HC96 672 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 WDR62O43379 1518 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 WDR97A6NE52 1622 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 TNIKQ9UKE5 1360 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 CUX2O14529 1486 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 PRXQ9BXM0 1461 aa7.55□□□□□ -1.2
DEPDC1B-203ENST00000505017 CYP2C8P10632 490 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 NAT2P11245 290 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 THBS2P35442 1172 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 SLC6A11P48066 632 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 GFRA1P56159 465 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 CR1LQ2VPA4 569 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 E4F1Q66K89 784 aaPredicted RBP7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 CEP68Q76N32 757 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 MCF2L2Q86YR7 1114 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 RIOX2Q8IUF8 465 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 TMEM145Q8NBT3 493 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 DDX1Q92499 740 aaKnown RBP7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
DEPDC1B-203ENST00000505017 GJB6O95452 261 aa7.53□□□□□ -1.2
DEPDC1B-203ENST00000505017 SNRPB2P08579 225 aaKnown RBP7.53□□□□□ -1.2
DEPDC1B-203ENST00000505017 RPL11P62913 178 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms