RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FGD4Q96M96 766 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 MXRA8Q9BRK3 442 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 TSKSQ9UJT2 592 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 ASTN1O14525 1302 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 PLXNB2O15031 1838 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 MEIS1O00470 390 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 WNT7AO00755 349 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 EIF3JO75822 258 aaKnown RBP15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 BAG4O95429 457 aaKnown RBP15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 CYP2B6P20813 491 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 NASPP49321 788 aaPredicted RBP15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 MRPS9P82933 396 aaKnown RBP15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 SLC39A14Q15043 492 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 STK38Q15208 465 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 Q4G0T1 1027 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 PRR16Q569H4 304 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 CLEC17AQ6ZS10 378 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 NIPA1Q7RTP0 329 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 NLRX1Q86UT6 975 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 PLA2G4DQ86XP0 818 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 MSL3Q8N5Y2 521 aaKnown RBP15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 JMYQ8N9B5 988 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 NPLOC4Q8TAT6 608 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 MAML3Q96JK9 1138 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 CHAMP1Q96JM3 812 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 ZFP91Q96JP5 570 aaPredicted RBP15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 MBOAT7Q96N66 472 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 GBP4Q96PP9 640 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 APBA2Q99767 749 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 CNPY2Q9Y2B0 182 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 UBIAD1Q9Y5Z9 338 aa15.71■□□□□ 0.11
CYSTM1-202ENST00000504227 MYH7BA7E2Y1 1941 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 FAM86B1E9PN63 330 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 MARCH6O60337 910 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 NEMFO60524 1076 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 YEATS4O95619 227 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 FAM86B2P0C5J1 330 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 XRCC5P13010 732 aaKnown RBP15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 FLT3LGP49771 235 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 PTGDRQ13258 359 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 OLFML2BQ68BL8 750 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 MAMDC4Q6UXC1 1216 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 MORC4Q8TE76 937 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 SPATA32Q96LK8 384 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 TINF2Q9BSI4 451 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 FTOQ9C0B1 505 aaKnown RBP eCLIP15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 JADE2Q9NQC1 790 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 SRRDQ9UH36 339 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 RCOR1Q9UKL0 485 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 GABRQQ9UN88 632 aa15.7■□□□□ 0.1
CYSTM1-202ENST00000504227 LAD1O00515 517 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 MAFGO15525 162 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 FIBPO43427 364 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 ITGB5P18084 799 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 SETQ01105 290 aaPredicted RBP15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 PRKCZQ05513 592 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 CALCRLQ16602 461 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 GNPTABQ3T906 1256 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 ARMCX2Q7L311 632 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 TRMT44Q8IYL2 757 aaKnown RBP15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 LINC00301Q8NCQ3 95 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 CYP2W1Q8TAV3 490 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 GPRASP2Q96D09 838 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 CDHR1Q96JP9 859 aa15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 INPP4AQ96PE3 977 aaPredicted RBP15.69■□□□□ 0.1
CYSTM1-202ENST00000504227 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 IGLV3-22A0A075B6J6 115 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 TBX3O15119 743 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 SPTLC2O15270 562 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 SLC37A4O43826 429 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 OR52Z1P0C646 297 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 PRMT2P55345 433 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 IRF5Q13568 498 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 MTMR1Q13613 665 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 PTPAQ15257 358 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 SLFN12Q8IYM2 578 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 KCNG4Q8TDN1 519 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 LENG9Q96B70 501 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 FAM20AQ96MK3 541 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 WDR11Q9BZH6 1224 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 DDX49Q9Y6V7 483 aaKnown RBP15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 ZNF236Q9UL36 1845 aa15.68■□□□□ 0.1
CYSTM1-202ENST00000504227 MGAMO43451 1857 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 GOLGA6L22H0YM25 854 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 MSH4O15457 936 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 SNAI1O95863 264 aaPredicted RBP15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 ARP10275 920 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 MARCKSP29966 332 aaPredicted RBP15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 PRPHP41219 470 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 CAP1Q01518 475 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 CCL14Q16627 93 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 MFSD14CQ5VZR4 134 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms