RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 Q6ZUG5 572 aa25.4■■□□□ 1.66
CCHCR1-217ENST00000503420 VSIG10LQ86VR7 867 aa25.4■■□□□ 1.66
CCHCR1-217ENST00000503420 MTG1Q9BT17 334 aaPredicted RBP25.4■■□□□ 1.66
CCHCR1-217ENST00000503420 PCDH10Q9P2E7 1040 aa25.4■■□□□ 1.66
CCHCR1-217ENST00000503420 CCDC196A0A1B0GTZ2 297 aa25.39■■□□□ 1.66
CCHCR1-217ENST00000503420 A6NJR5 290 aa25.39■■□□□ 1.66
CCHCR1-217ENST00000503420 ARIH2O95376 493 aa25.39■■□□□ 1.66
CCHCR1-217ENST00000503420 CPA1P15085 419 aa25.39■■□□□ 1.66
CCHCR1-217ENST00000503420 PSTPIP2Q9H939 334 aa25.39■■□□□ 1.66
CCHCR1-217ENST00000503420 hCG_1642624A0A1W2PR95 340 aa25.38■■□□□ 1.65
CCHCR1-217ENST00000503420 CASTP20810 708 aaKnown RBP25.38■■□□□ 1.65
CCHCR1-217ENST00000503420 RCAN1P53805 252 aa25.38■■□□□ 1.65
CCHCR1-217ENST00000503420 PSMC6P62333 389 aa25.38■■□□□ 1.65
CCHCR1-217ENST00000503420 PURAQ00577 322 aaKnown RBP25.38■■□□□ 1.65
CCHCR1-217ENST00000503420 HEATR3Q7Z4Q2 680 aa25.38■■□□□ 1.65
CCHCR1-217ENST00000503420 DDX41Q9UJV9 622 aaKnown RBP25.38■■□□□ 1.65
CCHCR1-217ENST00000503420 RPS6KB1P23443 525 aa25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 LAMC2Q13753 1193 aa25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 USP17L6PQ6QN14 398 aa25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 FAM126BQ8IXS8 530 aa25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 DHX37Q8IY37 1157 aaKnown RBP25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 SLC43A3Q8NBI5 491 aa25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 AFG1LQ8WV93 481 aa25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 BRF1Q92994 677 aa25.37■■□□□ 1.65
CCHCR1-217ENST00000503420 PIK3CDO00329 1044 aa25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 STAM2O75886 525 aa25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 TIMP1P01033 207 aa25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 METAP2P50579 478 aaKnown RBP eCLIP25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 APOBRQ0VD83 1088 aa25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 GNPTABQ3T906 1256 aa25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 USP26Q9BXU7 913 aa25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 V9GY48 417 aaPredicted RBP25.36■■□□□ 1.65
CCHCR1-217ENST00000503420 TGFB3P10600 412 aa25.35■■□□□ 1.65
CCHCR1-217ENST00000503420 FPGSQ05932 587 aa25.35■■□□□ 1.65
CCHCR1-217ENST00000503420 IL31RAQ8NI17 732 aa25.35■■□□□ 1.65
CCHCR1-217ENST00000503420 TBX21Q9UL17 535 aa25.35■■□□□ 1.65
CCHCR1-217ENST00000503420 EIF5BO60841 1220 aaKnown RBP25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 SUPT20HL2P0C7V6 817 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 CHMP4BP1P59074 171 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 ARHGAP1Q07960 439 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 DGKDQ16760 1214 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 LRIT3Q3SXY7 679 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 FAM47CQ5HY64 1035 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 XRRA1Q6P2D8 792 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 CYP46A1Q9Y6A2 500 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 GRIN2DO15399 1336 aa25.34■■□□□ 1.65
CCHCR1-217ENST00000503420 SPDYE3A6NKU9 549 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 MEIS2O14770 477 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 CD4P01730 458 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 ITGB8P26012 769 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 NAPAP54920 295 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 RUFY3Q7L099 469 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 FBXL16Q8N461 479 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 GPKOWQ92917 476 aaPredicted RBP eCLIP25.33■■□□□ 1.655e-9■■■■□ 21.7
CCHCR1-217ENST00000503420 EMID1Q96A84 441 aaPredicted RBP25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 ZFP91Q96JP5 570 aaPredicted RBP25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 EHMT1Q9H9B1 1298 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 MLXIPQ9HAP2 919 aa25.33■■□□□ 1.65
CCHCR1-217ENST00000503420 CNTNAP5Q8WYK1 1306 aa25.33■■□□□ 1.64
CCHCR1-217ENST00000503420 MMP3P08254 477 aa25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 NBPF20Q3BBV1 942 aa25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 MFSD5Q6N075 450 aa25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 TMEM199Q8N511 208 aa25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 PPP1R12CQ9BZL4 782 aa25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 TRPV6Q9H1D0 765 aa25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 ALDH8A1Q9H2A2 487 aaPredicted RBP25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 RTEL1Q9NZ71 1219 aa25.32■■□□□ 1.64
CCHCR1-217ENST00000503420 RANBP2P49792 3224 aaKnown RBP25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 hCG_1984214I3L0E3 225 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 RGS20O76081 388 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 CDC27P30260 824 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 ADD1P35611 737 aaKnown RBP25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 AKAP17AQ02040 695 aaKnown RBP25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 CELF3Q5SZQ8 465 aaKnown RBP25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 NFRKBQ6P4R8 1299 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 NLRX1Q86UT6 975 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 ZNF713Q8N859 430 aaPredicted RBP25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 PPTC7Q8NI37 304 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 SPATA33Q96N06 139 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 ZSWIM6Q9HCJ5 1215 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 FRMPD4Q14CM0 1322 aa25.31■■□□□ 1.64
CCHCR1-217ENST00000503420 B4GALT4O60513 344 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 GGPS1O95749 300 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 PTPN11Q06124 597 aaPredicted RBP25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 FUT2Q10981 343 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 PPIGQ13427 754 aaKnown RBP eCLIP25.3■■□□□ 1.647e-7■■■□□ 18.8
CCHCR1-217ENST00000503420 SHHQ15465 462 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 PCNX4Q63HM2 1172 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 WWC2Q6AWC2 1192 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 PPP1R18Q6NYC8 613 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 TEX2Q8IWB9 1127 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 GLT8D2Q9H1C3 349 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 HIPK3Q9H422 1215 aa25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 FAM217BQ9NTX9 383 aaPredicted RBP25.3■■□□□ 1.64
CCHCR1-217ENST00000503420 MRPS9P82933 396 aaKnown RBP25.29■■□□□ 1.64
CCHCR1-217ENST00000503420 NEDD9Q14511 834 aa25.29■■□□□ 1.64
CCHCR1-217ENST00000503420 UBE2SQ16763 222 aa25.29■■□□□ 1.64
CCHCR1-217ENST00000503420 MYSM1Q5VVJ2 828 aa25.29■■□□□ 1.64
CCHCR1-217ENST00000503420 AGXT2Q9BYV1 514 aa25.29■■□□□ 1.64
CCHCR1-217ENST00000503420 TM6SF1Q9BZW5 370 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms