RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MYCNP04198 464 aaPredicted RBP18.88■□□□□ 0.61
SCLT1-205ENST00000503401 PHF20Q9BVI0 1012 aa18.88■□□□□ 0.61
SCLT1-205ENST00000503401 CRISPLD2Q9H0B8 497 aa18.88■□□□□ 0.61
SCLT1-205ENST00000503401 PCDHA4Q9UN74 947 aa18.88■□□□□ 0.61
SCLT1-205ENST00000503401 MSCO60682 206 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 EIF3JO75822 258 aaKnown RBP18.87■□□□□ 0.61
SCLT1-205ENST00000503401 RGS20O76081 388 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 RARBP10826 455 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 SMPD1P17405 629 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 XBP1P17861 261 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 IRX5P78411 483 aaPredicted RBP18.87■□□□□ 0.61
SCLT1-205ENST00000503401 TNFAIP2Q03169 654 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 AP3B2Q13367 1082 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 BICD2Q8TD16 824 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 WDR11Q9BZH6 1224 aa18.87■□□□□ 0.61
SCLT1-205ENST00000503401 ARIH2O95376 493 aa18.86■□□□□ 0.61
SCLT1-205ENST00000503401 PGK1P00558 417 aa18.86■□□□□ 0.61
SCLT1-205ENST00000503401 FOSP01100 380 aaPredicted RBP18.86■□□□□ 0.61
SCLT1-205ENST00000503401 GUCY1B3Q02153 619 aa18.86■□□□□ 0.61
SCLT1-205ENST00000503401 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
SCLT1-205ENST00000503401 BLIDQ8IZY5 108 aa18.86■□□□□ 0.61
SCLT1-205ENST00000503401 OGDHLQ9ULD0 1010 aa18.86■□□□□ 0.61
SCLT1-205ENST00000503401 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
SCLT1-205ENST00000503401 HMGN5P82970 282 aaKnown RBP18.85■□□□□ 0.61
SCLT1-205ENST00000503401 FAM184AQ8NB25 1140 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 OXER1Q8TDS5 423 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 SCFD2Q8WU76 684 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 COPS5Q92905 334 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 XPNPEP3Q9NQH7 507 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 RBM47A0AV96 593 aaKnown RBP18.85■□□□□ 0.61
SCLT1-205ENST00000503401 M0R2N6 131 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 DUSP11O75319 330 aaKnown RBP18.85■□□□□ 0.61
SCLT1-205ENST00000503401 LY6KQ17RY6 165 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 IQSEC1Q6DN90 963 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 TEX2Q8IWB9 1127 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 DAGLBQ8NCG7 672 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 EHMT1Q9H9B1 1298 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 GNEQ9Y223 722 aaKnown RBP18.85■□□□□ 0.61
SCLT1-205ENST00000503401 SYNRGQ9UMZ2 1314 aa18.85■□□□□ 0.61
SCLT1-205ENST00000503401 MYADML2A6NDP7 307 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 K7ELQ4 463 aaPredicted RBP18.84■□□□□ 0.61
SCLT1-205ENST00000503401 SORBS3O60504 671 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 TXNP10599 105 aaKnown RBP18.84■□□□□ 0.61
SCLT1-205ENST00000503401 SREBF1P36956 1147 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 KRT40Q6A162 431 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 GALNT17Q6IS24 598 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 DIS3LQ8TF46 1054 aaKnown RBP18.84■□□□□ 0.61
SCLT1-205ENST00000503401 SNX21Q969T3 373 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 C8orf76Q96K31 380 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 MRVI1Q9Y6F6 885 aa18.84■□□□□ 0.61
SCLT1-205ENST00000503401 DYNC1LI2O43237 492 aaPredicted RBP18.83■□□□□ 0.61
SCLT1-205ENST00000503401 ITGB5P18084 799 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 GJB2P29033 226 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 MNX1P50219 401 aaPredicted RBP18.83■□□□□ 0.61
SCLT1-205ENST00000503401 ARHGAP4P98171 946 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 CUL4AQ13619 759 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 TRIM29Q14134 588 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 TTLL4Q14679 1199 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 DUSP28Q4G0W2 176 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 CCDC62Q6P9F0 684 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 TLK2Q86UE8 772 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 FAM177A1Q8N128 213 aaPredicted RBP18.83■□□□□ 0.61
SCLT1-205ENST00000503401 CYP2W1Q8TAV3 490 aa18.83■□□□□ 0.61
SCLT1-205ENST00000503401 TNRC18O15417 2968 aaPredicted RBP18.83■□□□□ 0.6
SCLT1-205ENST00000503401 ADAMTS4O75173 837 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 MMP1P03956 469 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 C6orf222P0C671 652 aaPredicted RBP18.82■□□□□ 0.6
SCLT1-205ENST00000503401 SEMA3FQ13275 785 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 NR5A1Q13285 461 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 LRRC41Q15345 812 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 INPP4AQ96PE3 977 aaPredicted RBP18.82■□□□□ 0.6
SCLT1-205ENST00000503401 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 SMC3Q9UQE7 1217 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 KRT2P35908 639 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 BEX3Q00994 111 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 SP2Q02086 613 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 GNPTABQ3T906 1256 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 EARS2Q5JPH6 523 aaKnown RBP18.82■□□□□ 0.6
SCLT1-205ENST00000503401 XRRA1Q6P2D8 792 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 CRYGNQ8WXF5 182 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 DDX41Q9UJV9 622 aaKnown RBP18.82■□□□□ 0.6
SCLT1-205ENST00000503401 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.82■□□□□ 0.6
SCLT1-205ENST00000503401 UBIAD1Q9Y5Z9 338 aa18.82■□□□□ 0.6
SCLT1-205ENST00000503401 BTBD18B2RXH4 712 aa18.81■□□□□ 0.6
SCLT1-205ENST00000503401 STAM2O75886 525 aa18.81■□□□□ 0.6
SCLT1-205ENST00000503401 FARP2O94887 1054 aaPredicted RBP18.81■□□□□ 0.6
SCLT1-205ENST00000503401 MCTP2Q6DN12 878 aa18.81■□□□□ 0.6
SCLT1-205ENST00000503401 DIS3L2Q8IYB7 885 aaKnown RBP18.81■□□□□ 0.6
SCLT1-205ENST00000503401 OR6J1Q8NGC5 347 aa18.81■□□□□ 0.6
SCLT1-205ENST00000503401 TBCKQ8TEA7 893 aa18.81■□□□□ 0.6
SCLT1-205ENST00000503401 BCAS3Q9H6U6 928 aa18.81■□□□□ 0.6
SCLT1-205ENST00000503401 FAM205CA6NFA0 338 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 FAM86B1E9PN63 330 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 CTAGE5O15320 804 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 EDIL3O43854 480 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 FAM86B2P0C5J1 330 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 UBA1P22314 1058 aaKnown RBP18.8■□□□□ 0.6
SCLT1-205ENST00000503401 ZNF76P36508 570 aa18.8■□□□□ 0.6
SCLT1-205ENST00000503401 GJA9P57773 515 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms