RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 POTEDQ86YR6 584 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 TSEN2Q8NCE0 465 aaKnown RBP27.13■■□□□ 1.93
DDX41-202ENST00000503078 TLR10Q9BXR5 811 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 EIF3HO15372 352 aaKnown RBP eCLIP27.13■■□□□ 1.93
DDX41-202ENST00000503078 CPP00450 1065 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 TXKP42681 527 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 GLE1Q53GS7 698 aaKnown RBP27.13■■□□□ 1.93
DDX41-202ENST00000503078 C8orf74Q6P047 294 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 PDXDC1Q6P996 788 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 EDEM3Q9BZQ6 932 aa27.13■■□□□ 1.93
DDX41-202ENST00000503078 HSF2BPO75031 334 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 RASA1P20936 1047 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 RNF10Q8N5U6 811 aaKnown RBP27.12■■□□□ 1.93
DDX41-202ENST00000503078 NOX5Q96PH1 765 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 RUFY1Q96T51 708 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 GRIN2DO15399 1336 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 SSU72P8A0A1W2PR75 194 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 EBAG9O00559 213 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 GNGT1P63211 74 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 GFPT1Q06210 699 aaPredicted RBP27.12■■□□□ 1.93
DDX41-202ENST00000503078 SF3B2Q13435 895 aaKnown RBP27.12■■□□□ 1.93
DDX41-202ENST00000503078 TADA2BQ86TJ2 420 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 ANKRD13CQ8N6S4 541 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 LARP4BQ92615 738 aaKnown RBP27.12■■□□□ 1.93
DDX41-202ENST00000503078 PNMA5Q96PV4 448 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 TSKSQ9UJT2 592 aa27.12■■□□□ 1.93
DDX41-202ENST00000503078 KCNQ2O43526 872 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 LDHBP07195 334 aaKnown RBP27.11■■□□□ 1.93
DDX41-202ENST00000503078 RASSF7Q02833 373 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 KLHDC7AQ5VTJ3 777 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 DYMQ7RTS9 669 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 CACNA2D4Q7Z3S7 1137 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 BCAS4Q8TDM0 211 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 MTMR8Q96EF0 704 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 RBM12Q9NTZ6 932 aaKnown RBP27.11■■□□□ 1.93
DDX41-202ENST00000503078 NNTQ13423 1086 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 LRRC55Q6ZSA7 311 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 GPIHBP1Q8IV16 184 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 NLRP3Q96P20 1036 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 MTMR9Q96QG7 549 aa27.11■■□□□ 1.93
DDX41-202ENST00000503078 TOM1O60784 492 aa27.1■■□□□ 1.93
DDX41-202ENST00000503078 TGFBRAP1Q8WUH2 860 aa27.1■■□□□ 1.93
DDX41-202ENST00000503078 CDK5RAP3Q96JB5 506 aa27.1■■□□□ 1.93
DDX41-202ENST00000503078 EHD4Q9H223 541 aa27.1■■□□□ 1.93
DDX41-202ENST00000503078 RNF14Q9UBS8 474 aa27.1■■□□□ 1.93
DDX41-202ENST00000503078 BIN2Q9UBW5 565 aaPredicted RBP27.1■■□□□ 1.93
DDX41-202ENST00000503078 SEC63Q9UGP8 760 aaKnown RBP27.1■■□□□ 1.93
DDX41-202ENST00000503078 ATP2B2Q01814 1243 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 CFAP221Q4G0U5 840 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 TTMPQ5BVD1 217 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 HGSNATQ68CP4 663 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 REXO1Q8N1G1 1221 aaKnown RBP27.09■■□□□ 1.93
DDX41-202ENST00000503078 SHTN1A0MZ66 631 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 BAG3O95817 575 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 HOXA7P31268 230 aaPredicted RBP27.09■■□□□ 1.93
DDX41-202ENST00000503078 SLC1A4P43007 532 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 FXR2P51116 673 aaKnown RBP eCLIP27.09■■□□□ 1.93
DDX41-202ENST00000503078 SKOR1P84550 965 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 CALCRLQ16602 461 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 TBC1D9BQ66K14 1250 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 ARHGAP27Q6ZUM4 889 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 ARL8AQ96BM9 186 aa27.09■■□□□ 1.93
DDX41-202ENST00000503078 COL5A3P25940 1745 aaPredicted RBP27.09■■□□□ 1.93
DDX41-202ENST00000503078 RBAK-RBAKDNI3L0D1 243 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 BUB1O43683 1085 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 TSG101Q99816 390 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 NAV1Q8NEY1 1877 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 IRS2Q9Y4H2 1338 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 A6NNZ2 444 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 TUBB8Q3ZCM7 444 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 USP17L2Q6R6M4 530 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 IFT20Q8IY31 132 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 ZNF287Q9HBT7 754 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 RIC8AQ9NPQ8 531 aa27.08■■□□□ 1.93
DDX41-202ENST00000503078 SMARCA1P28370 1054 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 PPP4CP60510 307 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 TMEM266Q2M3C6 531 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 FOXR2Q6PJQ5 311 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 WDR66Q8TBY9 1149 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 RAD54LQ92698 747 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 FAM169AQ9Y6X4 670 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 ESYT2A0FGR8 921 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 NAP1L1P55209 391 aaKnown RBP27.07■■□□□ 1.92
DDX41-202ENST00000503078 GSTO1P78417 241 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 KCNMA1Q12791 1236 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 PSMD2Q13200 908 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 DIXDC1Q155Q3 683 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 TDRD12Q587J7 1177 aaKnown RBP27.07■■□□□ 1.92
DDX41-202ENST00000503078 ICE2Q659A1 982 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 IPO4Q8TEX9 1081 aaKnown RBP27.07■■□□□ 1.92
DDX41-202ENST00000503078 MS4A14Q96JA4 679 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 ZIM3Q96PE6 472 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 PIGSQ96S52 555 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 TANGO6Q9C0B7 1094 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 VAT1LQ9HCJ6 419 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 TMEM260Q9NX78 707 aa27.07■■□□□ 1.92
DDX41-202ENST00000503078 SAP30BPQ9UHR5 308 aaKnown RBP27.07■■□□□ 1.92
DDX41-202ENST00000503078 SLC9C1Q4G0N8 1177 aa27.06■■□□□ 1.92
DDX41-202ENST00000503078 NYXQ9GZU5 481 aa27.06■■□□□ 1.92
DDX41-202ENST00000503078 NUCKS1Q9H1E3 243 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms