RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 LAMA2P24043 3122 aaKnown RBP28.65■■■□□ 2.18
TRIO-204ENST00000502816 TLR3O15455 904 aaKnown RBP28.64■■■□□ 2.18
TRIO-204ENST00000502816 ARHGAP1Q07960 439 aa28.64■■■□□ 2.18
TRIO-204ENST00000502816 LY6KQ17RY6 165 aa28.64■■■□□ 2.18
TRIO-204ENST00000502816 KCNV1Q6PIU1 500 aa28.64■■■□□ 2.18
TRIO-204ENST00000502816 CMTR1Q8N1G2 835 aaKnown RBP28.64■■■□□ 2.18
TRIO-204ENST00000502816 MTG1Q9BT17 334 aaPredicted RBP28.64■■■□□ 2.18
TRIO-204ENST00000502816 GH1P01241 217 aa28.63■■■□□ 2.17
TRIO-204ENST00000502816 MICU3Q86XE3 530 aa28.63■■■□□ 2.17
TRIO-204ENST00000502816 PIBF1Q8WXW3 757 aa28.63■■■□□ 2.17
TRIO-204ENST00000502816 TCEANC2Q96MN5 208 aa28.63■■■□□ 2.17
TRIO-204ENST00000502816 MYH7BA7E2Y1 1941 aa28.63■■■□□ 2.17
TRIO-204ENST00000502816 MEIS2O14770 477 aa28.62■■■□□ 2.17
TRIO-204ENST00000502816 TGFB3P10600 412 aa28.62■■■□□ 2.17
TRIO-204ENST00000502816 FUT2Q10981 343 aa28.62■■■□□ 2.17
TRIO-204ENST00000502816 IL31RAQ8NI17 732 aa28.62■■■□□ 2.17
TRIO-204ENST00000502816 LRCH3Q96II8 777 aa28.62■■■□□ 2.17
TRIO-204ENST00000502816 ZBTB43O43298 467 aa28.61■■■□□ 2.17
TRIO-204ENST00000502816 STAM2O75886 525 aa28.61■■■□□ 2.17
TRIO-204ENST00000502816 PSMC6P62333 389 aa28.61■■■□□ 2.17
TRIO-204ENST00000502816 MFSD5Q6N075 450 aa28.61■■■□□ 2.17
TRIO-204ENST00000502816 FCHSD1Q86WN1 690 aa28.61■■■□□ 2.17
TRIO-204ENST00000502816 RAB11FIP4Q86YS3 637 aa28.61■■■□□ 2.17
TRIO-204ENST00000502816 AGXT2Q9BYV1 514 aa28.61■■■□□ 2.17
TRIO-204ENST00000502816 CENPBP07199 599 aaPredicted RBP28.6■■■□□ 2.17
TRIO-204ENST00000502816 MYL3P08590 195 aa28.6■■■□□ 2.17
TRIO-204ENST00000502816 CCND2P30279 289 aa28.6■■■□□ 2.17
TRIO-204ENST00000502816 TEX2Q8IWB9 1127 aa28.6■■■□□ 2.17
TRIO-204ENST00000502816 ALDH8A1Q9H2A2 487 aaPredicted RBP28.6■■■□□ 2.17
TRIO-204ENST00000502816 FAM217BQ9NTX9 383 aaPredicted RBP28.6■■■□□ 2.17
TRIO-204ENST00000502816 MRVI1Q9Y6F6 885 aa28.6■■■□□ 2.17
TRIO-204ENST00000502816 MMP3P08254 477 aa28.59■■■□□ 2.17
TRIO-204ENST00000502816 MYCLP12524 364 aaPredicted RBP28.59■■■□□ 2.17
TRIO-204ENST00000502816 FPGSQ05932 587 aa28.59■■■□□ 2.17
TRIO-204ENST00000502816 LAMC2Q13753 1193 aa28.59■■■□□ 2.17
TRIO-204ENST00000502816 SHHQ15465 462 aa28.59■■■□□ 2.17
TRIO-204ENST00000502816 AFG1LQ8WV93 481 aa28.59■■■□□ 2.17
TRIO-204ENST00000502816 JAKMIP1Q96N16 626 aaKnown RBP28.59■■■□□ 2.17
TRIO-204ENST00000502816 CNTNAP5Q8WYK1 1306 aa28.59■■■□□ 2.17
TRIO-204ENST00000502816 B4GALT4O60513 344 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 HOXD8P13378 290 aaPredicted RBP28.58■■■□□ 2.17
TRIO-204ENST00000502816 EPHB4P54760 987 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 MRPS9P82933 396 aaKnown RBP28.58■■■□□ 2.17
TRIO-204ENST00000502816 PTPN11Q06124 597 aaPredicted RBP28.58■■■□□ 2.17
TRIO-204ENST00000502816 RTN1Q16799 776 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 C9orf50Q5SZB4 431 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 XRRA1Q6P2D8 792 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 NFRKBQ6P4R8 1299 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 USP17L6PQ6QN14 398 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 BLOC1S2Q6QNY1 142 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 CUL5Q93034 780 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 INPP4AQ96PE3 977 aaPredicted RBP28.58■■■□□ 2.17
TRIO-204ENST00000502816 USP26Q9BXU7 913 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 NID2Q14112 1375 aa28.58■■■□□ 2.17
TRIO-204ENST00000502816 KLF18A0A0U1RQI7 1052 aa28.57■■■□□ 2.16
TRIO-204ENST00000502816 PSMA5P28066 241 aa28.57■■■□□ 2.16
TRIO-204ENST00000502816 ICAM3P32942 547 aa28.57■■■□□ 2.16
TRIO-204ENST00000502816 CCDC82Q8N4S0 544 aa28.57■■■□□ 2.16
TRIO-204ENST00000502816 PPTC7Q8NI37 304 aa28.57■■■□□ 2.16
TRIO-204ENST00000502816 TRPV6Q9H1D0 765 aa28.57■■■□□ 2.16
TRIO-204ENST00000502816 PSTPIP2Q9H939 334 aa28.57■■■□□ 2.16
TRIO-204ENST00000502816 CPA1P15085 419 aa28.56■■■□□ 2.16
TRIO-204ENST00000502816 RPS6KB1P23443 525 aa28.56■■■□□ 2.16
TRIO-204ENST00000502816 SP2Q02086 613 aa28.56■■■□□ 2.16
TRIO-204ENST00000502816 NBPF20Q3BBV1 942 aa28.56■■■□□ 2.16
TRIO-204ENST00000502816 MYSM1Q5VVJ2 828 aa28.56■■■□□ 2.16
TRIO-204ENST00000502816 Q6ZUG5 572 aa28.56■■■□□ 2.16
TRIO-204ENST00000502816 SMARCC2Q8TAQ2 1214 aa28.56■■■□□ 2.16
TRIO-204ENST00000502816 SUPT20HL2P0C7V6 817 aa28.55■■■□□ 2.16
TRIO-204ENST00000502816 CASTP20810 708 aaKnown RBP28.55■■■□□ 2.16
TRIO-204ENST00000502816 CDC27P30260 824 aa28.55■■■□□ 2.16
TRIO-204ENST00000502816 EVCP57679 992 aa28.55■■■□□ 2.16
TRIO-204ENST00000502816 DGKDQ16760 1214 aa28.55■■■□□ 2.16
TRIO-204ENST00000502816 CELF3Q5SZQ8 465 aaKnown RBP28.55■■■□□ 2.16
TRIO-204ENST00000502816 PCNX4Q63HM2 1172 aa28.55■■■□□ 2.16
TRIO-204ENST00000502816 hCG_1642624A0A1W2PR95 340 aa28.54■■■□□ 2.16
TRIO-204ENST00000502816 GOLGA8AA7E2F4 631 aa28.54■■■□□ 2.16
TRIO-204ENST00000502816 GOLGA8BA8MQT2 603 aa28.54■■■□□ 2.16
TRIO-204ENST00000502816 hCG_1984214I3L0E3 225 aa28.54■■■□□ 2.16
TRIO-204ENST00000502816 PPIGQ13427 754 aaKnown RBP eCLIP28.54■■■□□ 2.165e-9■□□□□ 9.5
TRIO-204ENST00000502816 SESTD1Q86VW0 696 aa28.54■■■□□ 2.16
TRIO-204ENST00000502816 DHX37Q8IY37 1157 aaKnown RBP28.54■■■□□ 2.16
TRIO-204ENST00000502816 TMEM199Q8N511 208 aa28.54■■■□□ 2.16
TRIO-204ENST00000502816 ZNF713Q8N859 430 aaPredicted RBP28.54■■■□□ 2.16
TRIO-204ENST00000502816 KAT2BQ92831 832 aa28.54■■■□□ 2.16
TRIO-204ENST00000502816 NOC4LQ9BVI4 516 aaKnown RBP28.54■■■□□ 2.16
TRIO-204ENST00000502816 CCDC196A0A1B0GTZ2 297 aa28.53■■■□□ 2.16
TRIO-204ENST00000502816 SPATA31C2B4DYI2 1134 aa28.53■■■□□ 2.16
TRIO-204ENST00000502816 PPFIA4O75335 1185 aa28.53■■■□□ 2.16
TRIO-204ENST00000502816 UBA1P22314 1058 aaKnown RBP28.53■■■□□ 2.16
TRIO-204ENST00000502816 GNPTABQ3T906 1256 aa28.53■■■□□ 2.16
TRIO-204ENST00000502816 HIPK3Q9H422 1215 aa28.53■■■□□ 2.16
TRIO-204ENST00000502816 FGD1P98174 961 aa28.52■■■□□ 2.16
TRIO-204ENST00000502816 APOBRQ0VD83 1088 aa28.52■■■□□ 2.16
TRIO-204ENST00000502816 WWC2Q6AWC2 1192 aa28.52■■■□□ 2.16
TRIO-204ENST00000502816 PPP1R18Q6NYC8 613 aa28.52■■■□□ 2.16
TRIO-204ENST00000502816 C16orf59Q7L2K0 433 aa28.52■■■□□ 2.16
TRIO-204ENST00000502816 GPKOWQ92917 476 aaPredicted RBP eCLIP28.52■■■□□ 2.16
TRIO-204ENST00000502816 BRF1Q92994 677 aa28.52■■■□□ 2.16
TRIO-204ENST00000502816 TM6SF1Q9BZW5 370 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms