RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 DDX41Q9UJV9 622 aaKnown RBP26.34■■□□□ 1.81
TNFRSF25-216ENST00000502588 SORBS3O60504 671 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 EIF3JO75822 258 aaKnown RBP26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 CHMP4BP1P59074 171 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 ZNF697Q5TEC3 545 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 NFXL1Q6ZNB6 911 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 SRBD1Q8N5C6 995 aaKnown RBP26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 CTCFLQ8NI51 663 aaPredicted RBP26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 GPKOWQ92917 476 aaPredicted RBP eCLIP26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 VWCEQ96DN2 955 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 SCLYQ96I15 445 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 TMEM87BQ96K49 555 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 SPZ1Q9BXG8 430 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 STXBP5LQ9Y2K9 1186 aa26.33■■□□□ 1.81
TNFRSF25-216ENST00000502588 GCOM1H8Y6P7 765 aaPredicted RBP26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 RBAK-RBAKDNI3L0D1 243 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 POLR2MP0CAP2 368 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 BRDTQ58F21 947 aaPredicted RBP26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 TCEANC2Q96MN5 208 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 MAP3K14Q99558 947 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 MTA3Q9BTC8 594 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 SEZ6LQ9BYH1 1024 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 IL23AQ9NPF7 189 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 MRVI1Q9Y6F6 885 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 CDH23Q9H251 3354 aa26.32■■□□□ 1.8
TNFRSF25-216ENST00000502588 CCDC69A6NI79 296 aa26.31■■□□□ 1.8
TNFRSF25-216ENST00000502588 GRXCR1A8MXD5 290 aa26.31■■□□□ 1.8
TNFRSF25-216ENST00000502588 RASIP1Q5U651 963 aa26.31■■□□□ 1.8
TNFRSF25-216ENST00000502588 RASEFQ8IZ41 740 aa26.31■■□□□ 1.8
TNFRSF25-216ENST00000502588 KAT2BQ92831 832 aa26.31■■□□□ 1.8
TNFRSF25-216ENST00000502588 MAP3K20Q9NYL2 800 aaKnown RBP26.31■■□□□ 1.8
TNFRSF25-216ENST00000502588 hCG_1642624A0A1W2PR95 340 aa26.3■■□□□ 1.8
TNFRSF25-216ENST00000502588 VSIG10LQ86VR7 867 aa26.3■■□□□ 1.8
TNFRSF25-216ENST00000502588 SEMA6BQ9H3T3 888 aa26.3■■□□□ 1.8
TNFRSF25-216ENST00000502588 CXXC1Q9P0U4 656 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF25-216ENST00000502588 KPNA6O60684 536 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 CDC45O75419 566 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 KIF5BP33176 963 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 LIFRP42702 1097 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 SP2Q02086 613 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 ADCK5Q3MIX3 580 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 NFRKBQ6P4R8 1299 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 TET1Q8NFU7 2136 aa26.29■■□□□ 1.8
TNFRSF25-216ENST00000502588 ZNF286BP0CG31 522 aa26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 PBX2P40425 430 aa26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 PSRC1Q6PGN9 363 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 SAMD3Q8N6K7 520 aa26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 RRP36Q96EU6 259 aaKnown RBP26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 CTAGE1Q96RT6 745 aa26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 CDX2Q99626 313 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 BCAS3Q9H6U6 928 aa26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 FRMPD4Q14CM0 1322 aa26.28■■□□□ 1.8
TNFRSF25-216ENST00000502588 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 DNAJB2P25686 324 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 CCND2P30279 289 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 MRPS9P82933 396 aaKnown RBP26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 TRAF1Q13077 416 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 USP17L6PQ6QN14 398 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 OTOP2Q7RTS6 562 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 MICU3Q86XE3 530 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 EMID1Q96A84 441 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 CCDC136Q96JN2 1154 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 PTPRSQ13332 1948 aa26.27■■□□□ 1.8
TNFRSF25-216ENST00000502588 SUPT20HL2P0C7V6 817 aa26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 UBA1P22314 1058 aaKnown RBP26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 GDF6Q6KF10 455 aaPredicted RBP26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 DHX37Q8IY37 1157 aaKnown RBP26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 TMTC2Q8N394 836 aa26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 CCDC82Q8N4S0 544 aa26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 HERVK_113Q902F9 699 aa26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 SLC12A7Q9Y666 1083 aa26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 EYSQ5T1H1 3165 aa26.26■■□□□ 1.79
TNFRSF25-216ENST00000502588 GGPS1O95749 300 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 SMARCA1P28370 1054 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 HSDL1Q3SXM5 330 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 MYSM1Q5VVJ2 828 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 TMTC3Q6ZXV5 915 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 SGMS1Q86VZ5 419 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 PPTC7Q8NI37 304 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 MYLIPQ8WY64 445 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 NEK1Q96PY6 1258 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 BRPF3Q9ULD4 1205 aa26.25■■□□□ 1.79
TNFRSF25-216ENST00000502588 MEIS2O14770 477 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 FGBP02675 491 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 CASTP20810 708 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 EXOSC10Q01780 885 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 SEMA3FQ13275 785 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 LAMC2Q13753 1193 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 DGKDQ16760 1214 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 CELF3Q5SZQ8 465 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 RNF20Q5VTR2 975 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 FANCBQ8NB91 859 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 LZTS2Q9BRK4 669 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 PBX4Q9BYU1 374 aa26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 SEC63Q9UGP8 760 aaKnown RBP26.24■■□□□ 1.79
TNFRSF25-216ENST00000502588 CALM1P0DP23 149 aa26.23■■□□□ 1.79
TNFRSF25-216ENST00000502588 CALM2P0DP24 149 aa26.23■■□□□ 1.79
TNFRSF25-216ENST00000502588 CALM3P0DP25 149 aa26.23■■□□□ 1.79
TNFRSF25-216ENST00000502588 PSEN2P49810 448 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms