RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	LENG1	Q96BZ8	264 aa	Predicted RBP	12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	CPVL	Q9H3G5	476 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	VAT1L	Q9HCJ6	419 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	CYP39A1	Q9NYL5	469 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	ATP11B	Q9Y2G3	1177 aa		12.41	□□□□□ -0.42
CDK11A-222	ENST00000498810	ABCB11	O95342	1321 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	CCDC69	A6NI79	296 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	NFIB	O00712	420 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	GDF9	O60383	454 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	PGK1	P00558	417 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	C6orf222	P0C671	652 aa	Predicted RBP	12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	SYN1	P17600	705 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	MMP16	P51512	607 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	LRRC41	Q15345	812 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	MAMDC4	Q6UXC1	1216 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	EEPD1	Q7L9B9	569 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	HOMER1	Q86YM7	354 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	ADGRF4	Q8IZF3	695 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	FAM133A	Q8N9E0	248 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	FERMT2	Q96AC1	680 aa		12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.4	□□□□□ -0.42
CDK11A-222	ENST00000498810	SYNRG	Q9UMZ2	1314 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	PRC1	O43663	620 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	SNAI1	O95863	264 aa	Predicted RBP	12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	MCM5	P33992	734 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	ADCYAP1R1	P41586	468 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	RTP1	P59025	263 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	PDE4D	Q08499	809 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	BAAT	Q14032	418 aa	Predicted RBP	12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	LRRC26	Q2I0M4	334 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	CCDC144B	Q3MJ40	725 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	SLC30A10	Q6XR72	485 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	FBXO11	Q86XK2	927 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	MCF2L2	Q86YR7	1114 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	FBXO16	Q8IX29	292 aa	Predicted RBP	12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	CTCFL	Q8NI51	663 aa	Predicted RBP	12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	ANKS1A	Q92625	1134 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	VTI1A	Q96AJ9	217 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	USB1	Q9BQ65	265 aa	Known RBP	12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	LSG1	Q9H089	658 aa	Known RBP	12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	AP5M1	Q9H0R1	490 aa		12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.39	□□□□□ -0.43
CDK11A-222	ENST00000498810	KLRF2	D3W0D1	207 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	SLC27A2	O14975	620 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	IGHA2	P01877	340 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	COL6A1	P12109	1028 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	KIF5B	P33176	963 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	ALDH5A1	P51649	535 aa	Predicted RBP	12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	FGD1	P98174	961 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	TNFAIP2	Q03169	654 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	TRAF1	Q13077	416 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	SEC23A	Q15436	765 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	QRICH1	Q2TAL8	776 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	HABP4	Q5JVS0	413 aa	Known RBP	12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	CREB3L3	Q68CJ9	461 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	STOX1	Q6ZVD7	989 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	MRPL11	Q9Y3B7	192 aa	Known RBP	12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	KIAA1217	Q5T5P2	1943 aa		12.38	□□□□□ -0.43
CDK11A-222	ENST00000498810	LTBP2	Q14767	1821 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	DUSP11	O75319	330 aa	Known RBP	12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	GUCA2A	Q02747	115 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	GRM4	Q14833	912 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	SYNE3	Q6ZMZ3	975 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	TLK2	Q86UE8	772 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	PCSK9	Q8NBP7	692 aa	Known RBP	12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	PIBF1	Q8WXW3	757 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	FGD4	Q96M96	766 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	AMN	Q9BXJ7	453 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	VTA1	Q9NP79	307 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	STARD7	Q9NQZ5	370 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	SEC63	Q9UGP8	760 aa	Known RBP	12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810	TAF6L	Q9Y6J9	622 aa		12.37	□□□□□ -0.43
CDK11A-222	ENST00000498810		A0A1W2PQ45	241 aa	Predicted RBP	12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810		A0A1W2PQY0	241 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	MOXD2P	A6NHM9	499 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	TRIM66	O15016	1216 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	ZEB2	O60315	1214 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	DXO	O77932	396 aa	Known RBP	12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	DDAH1	O94760	285 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	CFB	P00751	764 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	RPS6	P62753	249 aa	Known RBP	12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	TRIM60	Q495X7	471 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	SLC39A5	Q6ZMH5	540 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	ZNF654	Q8IZM8	581 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	STAG2	Q8N3U4	1231 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	TMEM87B	Q96K49	555 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	GLT1D1	Q96MS3	346 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	JMJD4	Q9H9V9	463 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	MAD2L2	Q9UI95	211 aa		12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.36	□□□□□ -0.43
CDK11A-222	ENST00000498810	LOC102724159	A0A0B4J2E5	919 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	ZBTB5	O15062	677 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	PQBP1	O60828	265 aa	Known RBP	12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	ADAMTS4	O75173	837 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	CALM1	P0DP23	149 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	CALM2	P0DP24	149 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	CALM3	P0DP25	149 aa		12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms