RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 FAM153BP0C7A2 387 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 NAT2P11245 290 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 PRPHP41219 470 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 MAGEA8P43361 318 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 MPP3Q13368 585 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 SIM2Q14190 667 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ANKRD1Q15327 319 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 FAM153CQ494X1 144 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 HIBCHQ6NVY1 386 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ARHGAP22Q7Z5H3 698 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 NLRP14Q86W24 1093 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ERICH1Q86X53 443 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 FAM81AQ8TBF8 368 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 KCNN1Q92952 543 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZSCAN31Q96LW9 406 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 FAM126AQ9BYI3 521 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 FHDC1Q9C0D6 1143 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 SAMSN1Q9NSI8 373 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 FAM153AQ9UHL3 310 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 RCOR1Q9UKL0 485 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 COL18A1P39060 1754 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 TMCO5BA8MYB1 307 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 B4E1Z4 1266 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 E7EVH7 732 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 E7EWF7 191 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 TNFRSF10BO14763 440 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 PRKAB2O43741 272 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 CDKL5O76039 1030 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 CSF1RP07333 972 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 NAT1P18440 290 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTDSPL2Q05D32 466 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 PDCD2Q16342 344 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 C10orf62Q5T681 223 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 MICU3Q86XE3 530 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPATA5Q8NB90 893 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 APPBP2Q92624 585 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 UCN2Q96RP3 112 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYL10Q9BUA6 226 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 DDX56Q9NY93 547 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 RGL1Q9NZL6 768 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 HMG20BQ9P0W2 317 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 LEMD3Q9Y2U8 911 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 C2CD2Q9Y426 696 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC4A4Q9Y6R1 1079 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 USP42Q9H9J4 1324 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF609O15014 1411 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 KLF18A0A0U1RQI7 1052 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 B4DLN1 442 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 C6orf229H3BNL8 230 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 POLR3DP05423 398 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 CLTAP09496 248 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 UQCRFS1P1P0C7P4 283 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 IMPDH2P12268 514 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 EIF4BP23588 611 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 ERVK-24P63145 666 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 RBL2Q08999 1139 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 PTGISQ16647 500 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZMYM1Q5SVZ6 1142 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 TRIM68Q6AZZ1 485 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCNI2Q6ZMN8 369 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 NOP9Q86U38 636 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SDR42E1Q8WUS8 393 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 RPGRQ92834 1020 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZIM3Q96PE6 472 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 ARPC5LQ9BPX5 153 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 GORASP1Q9BQQ3 440 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 MTFR1LQ9H019 292 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 HELLSQ9NRZ9 838 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 C5P01031 1676 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 PLCH1Q4KWH8 1693 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SCN11AQ9UI33 1791 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 BRWD3Q6RI45 1802 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYH7P12883 1935 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 ESYT3A0FGR9 886 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF233A6NK53 670 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 GOLGA8BA8MQT2 603 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 DCDC2CA8MYV0 355 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 F8W031 263 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 RIMBP2O15034 1052 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 PRC1O43663 620 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 PRDM1O75626 825 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 PDE6AP16499 860 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 KCNJ2P63252 427 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 RNASELQ05823 741 aaKnown RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SFMBT2Q5VUG0 894 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCDC73Q6ZRK6 1079 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 STOX1Q6ZVD7 989 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 FBXO33Q7Z6M2 555 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC51AQ86UW1 340 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 CYFIP2Q96F07 1278 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 L3MBTL3Q96JM7 780 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 VIPAS39Q9H9C1 493 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 KANSL2Q9H9L4 492 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPC25Q9HBM1 224 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 SH2B1Q9NRF2 756 aaPredicted RBP6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 DENND2AQ9ULE3 1009 aa6.38□□□□□ -1.39
SOX2-OT-218ENST00000498731 AGAP1Q9UPQ3 857 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms