RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 LMCD1Q9NZU5 365 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 FARP1Q9Y4F1 1045 aaPredicted RBP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 SORBS3O60504 671 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 GJB5O95377 273 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 MMP3P08254 477 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 CKBP12277 381 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
CCDC171-209ENST00000498725 RPS6P62753 249 aaKnown RBP10.75□□□□□ -0.69
CCDC171-209ENST00000498725 NHLH1Q02575 133 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 IKBKEQ14164 716 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC171-209ENST00000498725 FBXL18Q96ME1 805 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 CTAGE1Q96RT6 745 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 FSD1Q9BTV5 496 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 HDAC6Q9UBN7 1215 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC171-209ENST00000498725 BRWD1Q9NSI6 2320 aa10.75□□□□□ -0.69
CCDC171-209ENST00000498725 MUC6Q6W4X9 2439 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 CSPG5O95196 566 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 ALADP13716 330 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 ZNF200P98182 395 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-209ENST00000498725 ZNF618Q5T7W0 954 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 MYOCDQ8IZQ8 938 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 C7orf31Q8N865 590 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
CCDC171-209ENST00000498725 RALGAPA2Q2PPJ7 1873 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 DOCK5Q9H7D0 1870 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 ABHD14A-ACY1A0A1B0GW23 586 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 DCXO43602 365 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 UPP2O95045 317 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 GH1P01241 217 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 ZNF286BP0CG31 522 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 CASTP20810 708 aaKnown RBP10.73□□□□□ -0.69
CCDC171-209ENST00000498725 PSEN2P49810 448 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 ARHGAP1Q07960 439 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 CLUL1Q15846 466 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 ZMYM1Q5SVZ6 1142 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 BTNL9Q6UXG8 535 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 DNERQ8NFT8 737 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 TBC1D5Q92609 795 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 KAT2BQ92831 832 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 WNT8BQ93098 351 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 TAAR1Q96RJ0 339 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 TMEM47Q9BQJ4 181 aa10.73□□□□□ -0.69
CCDC171-209ENST00000498725 LOC102724159A0A0B4J2E5 919 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 B4DLN1 442 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 FOXP2O15409 715 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 CXCL10P02778 98 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 TOP1P11387 765 aaKnown RBP10.72□□□□□ -0.69
CCDC171-209ENST00000498725 EDNRBP24530 442 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 MRPL12P52815 198 aaKnown RBP10.72□□□□□ -0.69
CCDC171-209ENST00000498725 GPM6BQ13491 265 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 MBTPS1Q14703 1052 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 PWP2Q15269 919 aaKnown RBP10.72□□□□□ -0.69
CCDC171-209ENST00000498725 TCEAL5Q5H9L2 206 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 C20orf194Q5TEA3 1177 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 VPS53Q5VIR6 699 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
CCDC171-209ENST00000498725 MRPL38Q96DV4 380 aaKnown RBP10.72□□□□□ -0.69
CCDC171-209ENST00000498725 CLDND1Q9NY35 253 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 GTF2IRD1Q9UHL9 959 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 INSL6Q9Y581 213 aa10.72□□□□□ -0.69
CCDC171-209ENST00000498725 LGR5O75473 907 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 AMHP03971 560 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 PDHBP11177 359 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 PTK7Q13308 1070 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 MFSD10Q14728 455 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 DGKDQ16760 1214 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 PTPROQ16827 1216 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 KIAA0753Q2KHM9 967 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 EPC2Q52LR7 807 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 CCDC62Q6P9F0 684 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 HFE2Q6ZVN8 426 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 BANK1Q8NDB2 785 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 DBF4BQ8NFT6 615 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 OTUD7AQ8TE49 926 aaPredicted RBP10.71□□□□□ -0.69
CCDC171-209ENST00000498725 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 UBA5Q9GZZ9 404 aa10.71□□□□□ -0.69
CCDC171-209ENST00000498725 CHMP4BQ9H444 224 aaKnown RBP10.71□□□□□ -0.69
CCDC171-209ENST00000498725 EFCAB14O75071 495 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 PARNO95453 639 aaKnown RBP10.7□□□□□ -0.7
CCDC171-209ENST00000498725 EIF2AK2P19525 551 aaKnown RBP10.7□□□□□ -0.7
CCDC171-209ENST00000498725 IRS1P35568 1242 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 THPOP40225 353 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 HAND2P61296 217 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 ZP2Q05996 745 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 ZNF543Q08ER8 600 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 HIC1Q14526 733 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 STXBP2Q15833 593 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
CCDC171-209ENST00000498725 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 SESTD1Q86VW0 696 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 MIER1Q8N108 512 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 NEK9Q8TD19 979 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 YME1L1Q96TA2 773 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 COL20A1Q9P218 1284 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms