RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	CTAGE5	O15320	804 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	CCND2	P30279	289 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	BMP8B	P34820	402 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	EVC	P57679	992 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	APOBR	Q0VD83	1088 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	PGM5	Q15124	567 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	GNPTAB	Q3T906	1256 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	TRIM60	Q495X7	471 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	CCDC62	Q6P9F0	684 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	SEPT14	Q6ZU15	432 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	ANKRD33	Q7Z3H0	272 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	HEATR3	Q7Z4Q2	680 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	FCHSD1	Q86WN1	690 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	COLQ	Q9Y215	455 aa	Predicted RBP	12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	CNTNAP5	Q8WYK1	1306 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	SPDYE3	A6NKU9	549 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	ARVCF	O00192	962 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	TLR3	O15455	904 aa	Known RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	GH1	P01241	217 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	MYCL	P12524	364 aa	Predicted RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	CPA1	P15085	419 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	BEX3	Q00994	111 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	AKAP17A	Q02040	695 aa	Known RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	TLE2	Q04725	743 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	LAMC2	Q13753	1193 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	CXCL17	Q6UXB2	119 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	EMID1	Q96A84	441 aa	Predicted RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	EHMT1	Q9H9B1	1298 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	DDX41	Q9UJV9	622 aa	Known RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	MRVI1	Q9Y6F6	885 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658		V9GY48	417 aa	Predicted RBP	12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	KIAA1217	Q5T5P2	1943 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658	FRMPD4	Q14CM0	1322 aa		12.09	□□□□□ -0.47
FXR1-222	ENST00000498658		A6NJR5	290 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	MEIS2	O14770	477 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	PQBP1	O60828	265 aa	Known RBP	12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	CLTB	P09497	229 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	SYN1	P17600	705 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	CDC27	P30260	824 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	CDK7	P50613	346 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	NAPA	P54920	295 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	FUT2	Q10981	343 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	ITGA7	Q13683	1181 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	ANKRD1	Q15327	319 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	MCTP2	Q6DN12	878 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	CPLX2	Q6PUV4	134 aa	Known RBP	12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	ZNF274	Q96GC6	653 aa	Predicted RBP	12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	GDF15	Q99988	308 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	MTG1	Q9BT17	334 aa	Predicted RBP	12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	PDRG1	Q9NUG6	133 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	BARHL2	Q9NY43	387 aa		12.08	□□□□□ -0.48
FXR1-222	ENST00000498658	FOS	P01100	380 aa	Predicted RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	PDIA3	P30101	505 aa	Known RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	ADD1	P35611	737 aa	Known RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	MAGEA10	P43363	369 aa	Predicted RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	PFKFB3	Q16875	520 aa	Predicted RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	HABP4	Q5JVS0	413 aa	Known RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	PCNX4	Q63HM2	1172 aa		12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	USP17L6P	Q6QN14	398 aa		12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	NLRX1	Q86UT6	975 aa		12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	CDHR1	Q96JP9	859 aa		12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	RNF26	Q9BY78	433 aa	Predicted RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	PRO3102	Q9H379	93 aa		12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	RIC8A	Q9NPQ8	531 aa		12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	TMEM39A	Q9NV64	488 aa		12.07	□□□□□ -0.48
FXR1-222	ENST00000498658	hCG_1642624	A0A1W2PR95	340 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	CPLX1	O14810	134 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	KIAA0355	O15063	1070 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	MAFG	O15525	162 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	PRPF3	O43395	683 aa	Known RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	FIBP	O43427	364 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	ARIH2	O95376	493 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	MYL3	P08590	195 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	SCG2	P13521	617 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	IFNAR1	P17181	557 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	ICAM3	P32942	547 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	ADCY7	P51828	1080 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	IRX5	P78411	483 aa	Predicted RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	PURA	Q00577	322 aa	Known RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	NEDD9	Q14511	834 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	DGKD	Q16760	1214 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	LY6K	Q17RY6	165 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	TMEM63B	Q5T3F8	832 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	WWC2	Q6AWC2	1192 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	DHX37	Q8IY37	1157 aa	Known RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	TRIM22	Q8IYM9	498 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	SLC43A3	Q8NBI5	491 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	PPTC7	Q8NI37	304 aa		12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	INPP4A	Q96PE3	977 aa	Predicted RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	UPF3B	Q9BZI7	483 aa	Known RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	UBE2O	Q9C0C9	1292 aa	Known RBP	12.06	□□□□□ -0.48
FXR1-222	ENST00000498658	PDLIM7	Q9NR12	457 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms