RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 SENP6Q9GZR1 1112 aaPredicted RBP6.36□□□□□ -1.39
NF1-217ENST00000498569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.36□□□□□ -1.39
NF1-217ENST00000498569 AS3MTQ9HBK9 375 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 TMOD4Q9NZQ9 345 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 DMGDHQ9UI17 866 aaKnown RBP6.36□□□□□ -1.39
NF1-217ENST00000498569 GJD2Q9UKL4 321 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 DENND2AQ9ULE3 1009 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 RAXQ9Y2V3 346 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 RNF114Q9Y508 228 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 SMCHD1A6NHR9 2005 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 ZNF236Q9UL36 1845 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 CHD7Q9P2D1 2997 aa6.36□□□□□ -1.39
NF1-217ENST00000498569 NAV1Q8NEY1 1877 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 UTYO14607 1347 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 GAKO14976 1311 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 COL11A1P12107 1806 aaPredicted RBP6.35□□□□□ -1.39
NF1-217ENST00000498569 FAM196BA6NMK8 535 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 ZBTB42B2RXF5 422 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 EYA2O00167 538 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 XRCC5P13010 732 aaKnown RBP6.35□□□□□ -1.39
NF1-217ENST00000498569 TAL1P17542 331 aaPredicted RBP6.35□□□□□ -1.39
NF1-217ENST00000498569 FGFR2P21802 821 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 MAPK4P31152 587 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 GRIK1P39086 918 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 BTDP43251 543 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 PLAURQ03405 335 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 CACNB2Q08289 660 aaPredicted RBP6.35□□□□□ -1.39
NF1-217ENST00000498569 GPRC5AQ8NFJ5 357 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 APBA2Q99767 749 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 PAGR1Q9BTK6 254 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 OSBPL5Q9H0X9 879 aaPredicted RBP6.35□□□□□ -1.39
NF1-217ENST00000498569 SIL1Q9H173 461 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 DDX4Q9NQI0 724 aaKnown RBP6.35□□□□□ -1.39
NF1-217ENST00000498569 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
NF1-217ENST00000498569 ZFATQ9P243 1243 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 MORF4L1Q9UBU8 362 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 ABCF2Q9UG63 623 aa6.35□□□□□ -1.39
NF1-217ENST00000498569 PARP14Q460N5 1801 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 MROH7-TTC4A0A0A0MT08 1334 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 GLRX3O76003 335 aaKnown RBP6.34□□□□□ -1.39
NF1-217ENST00000498569 GLB1P16278 677 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 CNGA1P29973 690 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 SEC13P55735 322 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 HERVK_113P62684 666 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 ERVK-24P63145 666 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 CCL14Q16627 93 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 WDR78Q5VTH9 848 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 MFSD14CQ5VZR4 134 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 SPTY2D1Q68D10 685 aaPredicted RBP6.34□□□□□ -1.39
NF1-217ENST00000498569 PLEKHH3Q7Z736 793 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 RBSNQ9H1K0 784 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 ATP11BQ9Y2G3 1177 aa6.34□□□□□ -1.39
NF1-217ENST00000498569 OAS3Q9Y6K5 1087 aaKnown RBP6.34□□□□□ -1.39
NF1-217ENST00000498569 A0A0G2JMZ2 1700 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 TMEM265A0A087WTH1 108 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 DNM1LO00429 736 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 RAD21O60216 631 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 MSCO60682 206 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 ALX3O95076 343 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 GRNP28799 593 aaKnown RBP6.33□□□□□ -1.4
NF1-217ENST00000498569 CAP2P40123 477 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 PHKA1P46020 1223 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 BACE1P56817 501 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 RTP1P59025 263 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 SMAD3P84022 425 aaKnown RBP6.33□□□□□ -1.4
NF1-217ENST00000498569 SHHQ15465 462 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 ERICH6Q7L0X2 663 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 GPR142Q7Z601 462 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 WDR63Q8IWG1 891 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 CACTIN-AS1Q8N1I8 211 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 GTF3C2Q8WUA4 911 aaPredicted RBP6.33□□□□□ -1.4
NF1-217ENST00000498569 PLD4Q96BZ4 506 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 IFT43Q96FT9 208 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 P2RX7Q99572 595 aaKnown RBP6.33□□□□□ -1.4
NF1-217ENST00000498569 NOL10Q9BSC4 688 aaKnown RBP6.33□□□□□ -1.4
NF1-217ENST00000498569 STOML1Q9UBI4 398 aa6.33□□□□□ -1.4
NF1-217ENST00000498569 HERC5Q9UII4 1024 aaKnown RBP6.33□□□□□ -1.4
NF1-217ENST00000498569 PDS5AQ29RF7 1337 aaKnown RBP6.32□□□□□ -1.4
NF1-217ENST00000498569 KBTBD13C9JR72 458 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
NF1-217ENST00000498569 PEX10O60683 326 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 DKK1O94907 266 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 TGFB1P01137 390 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 GHRHP01286 108 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 ASNSP08243 561 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 IGFBP4P22692 258 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 HOXA7P31268 230 aaPredicted RBP6.32□□□□□ -1.4
NF1-217ENST00000498569 CCNA1P78396 465 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 GSTO1P78417 241 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 MECOMQ03112 1051 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 RASGRF1Q13972 1273 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 C9orf50Q5SZB4 431 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 TEX11Q8IYF3 940 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 CRACR2BQ8N4Y2 399 aaPredicted RBP6.32□□□□□ -1.4
NF1-217ENST00000498569 LPAR1Q92633 364 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 FAM122AQ96E09 287 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 RNPC3Q96LT9 517 aaKnown RBP6.32□□□□□ -1.4
NF1-217ENST00000498569 UCN2Q96RP3 112 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 CEP41Q9BYV8 373 aa6.32□□□□□ -1.4
NF1-217ENST00000498569 MUC3BQ9H195 1237 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms