RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 FBXO16Q8IX29 292 aaPredicted RBP6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 BANK1Q8NDB2 785 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 PHOSPHO2Q8TCD6 241 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 SPIRE2Q8WWL2 714 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 DHX38Q92620 1227 aaKnown RBP6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 FRAT1Q92837 279 aaPredicted RBP6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 KIF1BPQ96EK5 621 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 DDX11Q96FC9 970 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 GMCL1Q96IK5 515 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 DNAJC2Q99543 621 aaKnown RBP6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 ACAD9Q9H845 621 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 VTA1Q9NP79 307 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 RNF146Q9NTX7 359 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 CYP39A1Q9NYL5 469 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 RABGEF1Q9UJ41 708 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 FEM1BQ9UK73 627 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 HCN4Q9Y3Q4 1203 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 FAM186AA6NE01 2351 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 DNAH14Q0VDD8 3507 aa6.69□□□□□ -1.34
CSNK1E-214ENST00000498529 GVINP1Q7Z2Y8 2422 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 FANCMQ8IYD8 2048 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 LOC102724159A0A0B4J2E5 919 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 PRR33A8MZF0 331 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 ARHGAP33O14559 1287 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 CXCL10P02778 98 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 FDX1P10109 184 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 RFC2P35250 354 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 WDR5P61964 334 aaKnown RBP6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 PWP2Q15269 919 aaKnown RBP6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 TKFCQ3LXA3 575 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 TMEM67Q5HYA8 995 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 FAM178BQ8IXR5 827 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 CPXCR1Q8N123 301 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 LRRC47Q8N1G4 583 aaKnown RBP6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 NEDD1Q8NHV4 660 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 GDPD5Q8WTR4 605 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 OSBP2Q969R2 916 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 PURBQ96QR8 312 aaKnown RBP6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 KCNK17Q96T54 332 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 LMCD1Q9NZU5 365 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 SLC4A4Q9Y6R1 1079 aa6.68□□□□□ -1.34
CSNK1E-214ENST00000498529 ASB14A6NK59 587 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 TRAK2O60296 914 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 BAIAP3O94812 1187 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 IQCF3P0C7M6 154 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 LINC00271P0C7V0 271 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 ALDH5A1P51649 535 aaPredicted RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 USP46P62068 366 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 DEFB103AP81534 67 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 NHLH1Q02575 133 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 MBTPS1Q14703 1052 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 TRIM71Q2Q1W2 868 aaKnown RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 PROX2Q3B8N5 592 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 LEXMQ3ZCV2 418 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 IQSEC1Q6DN90 963 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 NFRKBQ6P4R8 1299 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 SESTD1Q86VW0 696 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 ITPRIPQ8IWB1 547 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 RPUSD2Q8IZ73 545 aaKnown RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 ANKRD35Q8N283 1001 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 MICALL1Q8N3F8 863 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 NEK9Q8TD19 979 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 CLEC4DQ8WXI8 215 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 HLA-CQ95604 372 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 KIFC2Q96AC6 838 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 RANBP17Q9H2T7 1088 aaKnown RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 BOLA2Q9H3K6 86 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 UBE2ZQ9H832 354 aaPredicted RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 CERS4Q9HA82 394 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 ZBTB40Q9NUA8 1239 aa6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 RIF1Q5UIP0 2472 aaKnown RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 BAZ2BQ9UIF8 2168 aaKnown RBP6.67□□□□□ -1.34
CSNK1E-214ENST00000498529 ZNF292O60281 2723 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 LINC01553A4QN01 128 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 CCER2I3L3R5 266 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 M0R2C6 588 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 NFIBO00712 420 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 DYNC1LI2O43237 492 aaPredicted RBP6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 NBNO60934 754 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 ZBED4O75132 1171 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 ARIH2O95376 493 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 TTLL1O95922 423 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 BMP3P12645 472 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 HOXD8P13378 290 aaPredicted RBP6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 IL9P15248 144 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 STAT2P52630 851 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 ERVK-21P61565 698 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 PTPN11Q06124 597 aaPredicted RBP6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 NBPF20Q3BBV1 942 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 HSP90AB4PQ58FF6 505 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 CCDC62Q6P9F0 684 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 BTNL9Q6UXG8 535 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 SLC30A10Q6XR72 485 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 TMCO2Q7Z6W1 182 aaPredicted RBP6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 FAM160B2Q86V87 743 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms