RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 SKAP1Q86WV1 359 aa14.12□□□□□ -0.15
THBS3-209ENST00000498500 TBC1D10CQ8IV04 446 aa14.12□□□□□ -0.15
THBS3-209ENST00000498500 GJD3Q8N144 294 aa14.12□□□□□ -0.15
THBS3-209ENST00000498500 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
THBS3-209ENST00000498500 TGS1Q96RS0 853 aaKnown RBP14.12□□□□□ -0.15
THBS3-209ENST00000498500 SUGCTQ9HAC7 445 aa14.12□□□□□ -0.15
THBS3-209ENST00000498500 B4DLN1 442 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 SELPP16109 830 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 KCNA5P22460 613 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 MRPL12P52815 198 aaKnown RBP14.11□□□□□ -0.15
THBS3-209ENST00000498500 CSPP1Q1MSJ5 1256 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 CNKSR3Q6P9H4 555 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 CENPQQ7L2Z9 268 aaPredicted RBP14.11□□□□□ -0.15
THBS3-209ENST00000498500 FAM178BQ8IXR5 827 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 RAD9AQ99638 391 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 GPCPD1Q9NPB8 672 aa14.11□□□□□ -0.15
THBS3-209ENST00000498500 FRMPD2Q68DX3 1309 aaPredicted RBP14.11□□□□□ -0.15
THBS3-209ENST00000498500 MYH6P13533 1939 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.1□□□□□ -0.15
THBS3-209ENST00000498500 GJB5O95377 273 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 PARNO95453 639 aaKnown RBP14.1□□□□□ -0.15
THBS3-209ENST00000498500 NOVP48745 357 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 MFAP1P55081 439 aaKnown RBP14.1□□□□□ -0.15
THBS3-209ENST00000498500 HAND2P61296 217 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 ERVK-21P61565 698 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 RPS6P62753 249 aaKnown RBP14.1□□□□□ -0.15
THBS3-209ENST00000498500 LEXMQ3ZCV2 418 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 GDF6Q6KF10 455 aaPredicted RBP14.1□□□□□ -0.15
THBS3-209ENST00000498500 FAM117BQ6P1L5 589 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 BTNL9Q6UXG8 535 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 LRRC8DQ7L1W4 858 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 DNERQ8NFT8 737 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 CLEC4DQ8WXI8 215 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 DSCC1Q9BVC3 393 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 NEDD4P46934 1319 aa14.1□□□□□ -0.15
THBS3-209ENST00000498500 ABHD14A-ACY1A0A1B0GW23 586 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 LINC01553A4QN01 128 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 ALADP13716 330 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 IL9P15248 144 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 EDNRBP24530 442 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 CHMLP26374 656 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 IKBKEQ14164 716 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 GPNMBQ14956 572 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 PTCRAQ6ISU1 281 aaPredicted RBP14.09□□□□□ -0.15
THBS3-209ENST00000498500 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.09□□□□□ -0.15
THBS3-209ENST00000498500 AFG1LQ8WV93 481 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 TOMM22Q9NS69 142 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 PNMA2Q9UL42 364 aa14.09□□□□□ -0.15
THBS3-209ENST00000498500 MICAL3Q7RTP6 2002 aa14.08□□□□□ -0.15
THBS3-209ENST00000498500 NBNO60934 754 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 ARIH2O95376 493 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 MMP3P08254 477 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 CKBP12277 381 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 CASTP20810 708 aaKnown RBP14.08□□□□□ -0.16
THBS3-209ENST00000498500 CHST3Q7LGC8 479 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 SESTD1Q86VW0 696 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 CTAGE1Q96RT6 745 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 NLRC5Q86WI3 1866 aa14.08□□□□□ -0.16
THBS3-209ENST00000498500 PIEZO1Q92508 2521 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 EFCAB14O75071 495 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 GH1P01241 217 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 CXCL10P02778 98 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
THBS3-209ENST00000498500 MRE11P49959 708 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 RRP12Q5JTH9 1297 aaKnown RBP14.07□□□□□ -0.16
THBS3-209ENST00000498500 SEPT14Q6ZU15 432 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 C7orf31Q8N865 590 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 DHX38Q92620 1227 aaKnown RBP14.07□□□□□ -0.16
THBS3-209ENST00000498500 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 ALG1Q9BT22 464 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 GTF2IRD1Q9UHL9 959 aa14.07□□□□□ -0.16
THBS3-209ENST00000498500 GRXCR2A6NFK2 248 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 PCP11498 1178 aaKnown RBP14.06□□□□□ -0.16
THBS3-209ENST00000498500 LY6KQ17RY6 165 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 TCTN1Q2MV58 587 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 PUS10Q3MIT2 529 aaKnown RBP14.06□□□□□ -0.16
THBS3-209ENST00000498500 USH1GQ495M9 461 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 CCDC62Q6P9F0 684 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 KAT2BQ92831 832 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 C17orf80Q9BSJ5 609 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 HDAC6Q9UBN7 1215 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 CTNNA3Q9UI47 895 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 INSL6Q9Y581 213 aa14.06□□□□□ -0.16
THBS3-209ENST00000498500 SGSM2O43147 1006 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 PDHBP11177 359 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 PTH1RQ03431 593 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 ARHGAP1Q07960 439 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 RBL2Q08999 1139 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 DGKDQ16760 1214 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 PTPROQ16827 1216 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 KATNAL1Q9BW62 490 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 TCP11L1Q9NUJ3 509 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 WDR19Q8NEZ3 1342 aa14.05□□□□□ -0.16
THBS3-209ENST00000498500 H3BQ06 376 aaPredicted RBP14.04□□□□□ -0.16
THBS3-209ENST00000498500 DCXO43602 365 aa14.04□□□□□ -0.16
THBS3-209ENST00000498500 AMHP03971 560 aa14.04□□□□□ -0.16
THBS3-209ENST00000498500 PSEN2P49810 448 aa14.04□□□□□ -0.16
THBS3-209ENST00000498500 PTK7Q13308 1070 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms