RNA–Protein interactions for RNA: ENST00000498376.1

RNF123-213, Transcript of ring finger protein 123, human

TSL 3

Gene RNF123, Length 746 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF123-213	ENST00000498376	SMARCC2	Q8TAQ2	1214 aa		10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	CUL5	Q93034	780 aa		10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	LARP6	Q9BRS8	491 aa	Known RBP	10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	PSTPIP2	Q9H939	334 aa		10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	PDLIM7	Q9NR12	457 aa		10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	DDX41	Q9UJV9	622 aa	Known RBP	10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	CYP46A1	Q9Y6A2	500 aa		10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	GRIN2D	O15399	1336 aa		10.81	□□□□□ -0.68
RNF123-213	ENST00000498376	KIAA1217	Q5T5P2	1943 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	RANBP2	P49792	3224 aa	Known RBP	10.8	□□□□□ -0.68
RNF123-213	ENST00000498376		A0A0U1RQG5	324 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	DCDC2C	A8MYV0	355 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	ARVCF	O00192	962 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	PIK3CD	O00329	1044 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	PPFIA3	O75145	1194 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	SEC24B	O95487	1268 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	MYL3	P08590	195 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	CLTB	P09497	229 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	ITGB8	P26012	769 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	CCND2	P30279	289 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	CCT2	P78371	535 aa	Known RBP	10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	MRPS9	P82933	396 aa	Known RBP	10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	FAAP100	Q0VG06	881 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	UBE2S	Q16763	222 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	TYW1B	Q6NUM6	668 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	ANKRD33	Q7Z3H0	272 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	AFG1L	Q8WV93	481 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	TOX2	Q96NM4	488 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	TM6SF1	Q9BZW5	370 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	PRKAG2	Q9UGJ0	569 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	MRVI1	Q9Y6F6	885 aa		10.8	□□□□□ -0.68
RNF123-213	ENST00000498376	CCDC196	A0A1B0GTZ2	297 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376		A6NJR5	290 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	STXBP3	O00186	592 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	SORBS3	O60504	671 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	CABYR	O75952	493 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	GH1	P01241	217 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	PDIA3	P30101	505 aa	Known RBP	10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	BMP8B	P34820	402 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	CPT1A	P50416	773 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	NAPA	P54920	295 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	EVC	P57679	992 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	PURA	Q00577	322 aa	Known RBP	10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	SP2	Q02086	613 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	ARHGAP1	Q07960	439 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	ITGA7	Q13683	1181 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	SLC43A3	Q8NBI5	491 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	PPP1R13L	Q8WUF5	828 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	BAD	Q92934	168 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	UBE2O	Q9C0C9	1292 aa	Known RBP	10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	BCAS3	Q9H6U6	928 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	NCOA5	Q9HCD5	579 aa	Known RBP	10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	PDRG1	Q9NUG6	133 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	TMEM39A	Q9NV64	488 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	POLR3E	Q9NVU0	708 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	RTEL1	Q9NZ71	1219 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	FRMPD4	Q14CM0	1322 aa		10.79	□□□□□ -0.68
RNF123-213	ENST00000498376	NID2	Q14112	1375 aa		10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	KIAA0355	O15063	1070 aa		10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	NTRK3	Q16288	839 aa		10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	BRDT	Q58F21	947 aa	Predicted RBP	10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	FAM126B	Q8IXS8	530 aa		10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	PHKB	Q93100	1093 aa		10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	MTG1	Q9BT17	334 aa	Predicted RBP	10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	TRPV6	Q9H1D0	765 aa		10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	MROH7	Q68CQ1	1323 aa		10.78	□□□□□ -0.68
RNF123-213	ENST00000498376	SMCO2	A6NFE2	343 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	PRPF3	O43395	683 aa	Known RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	KPNA6	O60684	536 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	GGPS1	O95749	300 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	CD4	P01730	458 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	MMP3	P08254	477 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	TGFB3	P10600	412 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	RAG1	P15918	1043 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	UBA1	P22314	1058 aa	Known RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	FXR1	P51114	621 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	CHMP4BP1	P59074	171 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	STK3	Q13188	491 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	SEMA3F	Q13275	785 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	LAMC2	Q13753	1193 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	PKN1	Q16512	942 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	PFKFB3	Q16875	520 aa	Predicted RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	NBPF20	Q3BBV1	942 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	CELF3	Q5SZQ8	465 aa	Known RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	MYSM1	Q5VVJ2	828 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	PCNX4	Q63HM2	1172 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	DHX37	Q8IY37	1157 aa	Known RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	EMID1	Q96A84	441 aa	Predicted RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	ZNF274	Q96GC6	653 aa	Predicted RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	PGBD1	Q96JS3	809 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	INPP4A	Q96PE3	977 aa	Predicted RBP	10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	RIC8A	Q9NPQ8	531 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	BARHL2	Q9NY43	387 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	TBX21	Q9UL17	535 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	PCDHA6	Q9UN73	950 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	PCDHA8	Q9Y5H6	950 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	MYH7B	A7E2Y1	1941 aa		10.77	□□□□□ -0.69
RNF123-213	ENST00000498376	LTBP2	Q14767	1821 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms