RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 SAMD3Q8N6K7 520 aa16.94■□□□□ 0.3
HPS1-214ENST00000498219 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
HPS1-214ENST00000498219 CUL5Q93034 780 aa16.94■□□□□ 0.3
HPS1-214ENST00000498219 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
HPS1-214ENST00000498219 ZNF274Q96GC6 653 aaPredicted RBP16.94■□□□□ 0.3
HPS1-214ENST00000498219 PSTPIP2Q9H939 334 aa16.94■□□□□ 0.3
HPS1-214ENST00000498219 STARD7Q9NQZ5 370 aa16.94■□□□□ 0.3
HPS1-214ENST00000498219 MOXD2PA6NHM9 499 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 STXBP3O00186 592 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 EIF3JO75822 258 aaKnown RBP16.93■□□□□ 0.3
HPS1-214ENST00000498219 RGS20O76081 388 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 CCND2P30279 289 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 NAPAP54920 295 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 TTLL4Q14679 1199 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 SNX17Q15036 470 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 ANKRD1Q15327 319 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 CCDC62Q6P9F0 684 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 CHRDL2Q6WN34 429 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 COLQQ9Y215 455 aaPredicted RBP16.93■□□□□ 0.3
HPS1-214ENST00000498219 Q9Y3F1 56 aa16.93■□□□□ 0.3
HPS1-214ENST00000498219 TRIOBPQ9H2D6 2365 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 PQBP1O60828 265 aaKnown RBP16.92■□□□□ 0.3
HPS1-214ENST00000498219 NKX3-2P78367 333 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 TLE2Q04725 743 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 SCRN1Q12765 414 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 NTRK3Q16288 839 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 ME3Q16798 604 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 VSIG10LQ86VR7 867 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 NECAB1Q8N987 351 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 PPP1R13LQ8WUF5 828 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 GLT1D1Q96MS3 346 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 PRDM5Q9NQX1 630 aaPredicted RBP16.92■□□□□ 0.3
HPS1-214ENST00000498219 RTEL1Q9NZ71 1219 aa16.92■□□□□ 0.3
HPS1-214ENST00000498219 PIK3CDO00329 1044 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 PFKFB2O60825 505 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 MYL3P08590 195 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 PSMC6P62333 389 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 MRPS9P82933 396 aaKnown RBP16.91■□□□□ 0.3
HPS1-214ENST00000498219 RABEP1Q15276 862 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 PKN1Q16512 942 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 SH3RF1Q7Z6J0 888 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 PGBD1Q96JS3 809 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 SLKQ9H2G2 1235 aaPredicted RBP16.91■□□□□ 0.3
HPS1-214ENST00000498219 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
HPS1-214ENST00000498219 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 FRMPD4Q14CM0 1322 aa16.91■□□□□ 0.3
HPS1-214ENST00000498219 ADAMTS3O15072 1205 aa16.9■□□□□ 0.3
HPS1-214ENST00000498219 NKRFO15226 690 aaKnown RBP eCLIP16.9■□□□□ 0.3
HPS1-214ENST00000498219 PRPF3O43395 683 aaKnown RBP16.9■□□□□ 0.3
HPS1-214ENST00000498219 SCG2P13521 617 aa16.9■□□□□ 0.3
HPS1-214ENST00000498219 ARHGAP1Q07960 439 aa16.9■□□□□ 0.3
HPS1-214ENST00000498219 PFKFB3Q16875 520 aaPredicted RBP16.9■□□□□ 0.3
HPS1-214ENST00000498219 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
HPS1-214ENST00000498219 TMEM260Q9NX78 707 aa16.9■□□□□ 0.3
HPS1-214ENST00000498219 BARHL2Q9NY43 387 aa16.9■□□□□ 0.3
HPS1-214ENST00000498219 LTBP2Q14767 1821 aa16.9■□□□□ 0.3
HPS1-214ENST00000498219 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
HPS1-214ENST00000498219 SMCO2A6NFE2 343 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 ZEB2O60315 1214 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 CD2BP2O95400 341 aaKnown RBP16.89■□□□□ 0.29
HPS1-214ENST00000498219 GH1P01241 217 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 IFNAR1P17181 557 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 MAGEA10P43363 369 aaPredicted RBP16.89■□□□□ 0.29
HPS1-214ENST00000498219 ADCY7P51828 1080 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 MDM2Q00987 491 aaPredicted RBP16.89■□□□□ 0.29
HPS1-214ENST00000498219 SP2Q02086 613 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 C1orf53Q5VUE5 145 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 AFG1LQ8WV93 481 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 RIC8AQ9NPQ8 531 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 PDLIM7Q9NR12 457 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 GRIN2DO15399 1336 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 ELP1O95163 1332 aa16.89■□□□□ 0.29
HPS1-214ENST00000498219 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 CPLX1O14810 134 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 CPT1AP50416 773 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 AKAP17AQ02040 695 aaKnown RBP16.88■□□□□ 0.29
HPS1-214ENST00000498219 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 TRIM43Q96BQ3 446 aaPredicted RBP16.88■□□□□ 0.29
HPS1-214ENST00000498219 RBM27Q9P2N5 1060 aaKnown RBP16.88■□□□□ 0.29
HPS1-214ENST00000498219 LIMCH1Q9UPQ0 1083 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 SCN10AQ9Y5Y9 1956 aa16.88■□□□□ 0.29
HPS1-214ENST00000498219 A6NJR5 290 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 hCG_1984214I3L0E3 225 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 ARVCFO00192 962 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 GGPS1O95749 300 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 MMP3P08254 477 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 UBA1P22314 1058 aaKnown RBP16.87■□□□□ 0.29
HPS1-214ENST00000498219 CDK7P50613 346 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 CHMP4BP1P59074 171 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 PURAQ00577 322 aaKnown RBP16.87■□□□□ 0.29
HPS1-214ENST00000498219 JAKMIP3Q5VZ66 844 aa16.87■□□□□ 0.29
HPS1-214ENST00000498219 PCNX4Q63HM2 1172 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms