RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GCOM1H8Y6P7 765 aaPredicted RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 CDC45O75419 566 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 EIF3JO75822 258 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 GH1P01241 217 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 POLR2MP0CAP2 368 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 CALM1P0DP23 149 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 CALM2P0DP24 149 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 CALM3P0DP25 149 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 MYCLP12524 364 aaPredicted RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 CSF2RAP15509 400 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 HOXA13P31271 388 aaPredicted RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 CYP2C18P33260 490 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 LIFRP42702 1097 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 SMAD3P84022 425 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 COL9A3Q14050 684 aaPredicted RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 PGM5Q15124 567 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 ZNF697Q5TEC3 545 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 FAM109BQ6ICB4 259 aaPredicted RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 PIBF1Q8WXW3 757 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 RRP36Q96EU6 259 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 PDCD2LQ9BRP1 358 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 SPZ1Q9BXG8 430 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 TRPV6Q9H1D0 765 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 ALDH8A1Q9H2A2 487 aaPredicted RBP9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 MRVI1Q9Y6F6 885 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 UMODL1Q5DID0 1318 aa9.81□□□□□ -0.84
HMGXB4-207ENST00000498212 MMP3P08254 477 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 SMARCA1P28370 1054 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 GNAQP50148 359 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 CLCN6P51797 869 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 ARHGAP1Q07960 439 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 NBPF20Q3BBV1 942 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 FAM47CQ5HY64 1035 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 TMEM240Q5SV17 173 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 NFRKBQ6P4R8 1299 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 FCHSD1Q86WN1 690 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 AFG1LQ8WV93 481 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 LZTS2Q9BRK4 669 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 NOC4LQ9BVI4 516 aaKnown RBP9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 LRRC2Q9BYS8 371 aa9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 TRMT13Q9NUP7 481 aaKnown RBP9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 SEC63Q9UGP8 760 aaKnown RBP9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 DDX41Q9UJV9 622 aaKnown RBP9.8□□□□□ -0.84
HMGXB4-207ENST00000498212 KAT6AQ92794 2004 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 RGS20O76081 388 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 PLEKHA8P1O95397 391 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 ACRP10323 421 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 RXRAP19793 462 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 CASTP20810 708 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 CCND2P30279 289 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 CCL23P55773 120 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 CHMP4BP1P59074 171 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 PTPN11Q06124 597 aaPredicted RBP9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 DGKDQ16760 1214 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 PSRC1Q6PGN9 363 aaPredicted RBP9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 KCNV1Q6PIU1 500 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 ZNF365Q70YC5 407 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 C16orf59Q7L2K0 433 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 VSIG10LQ86VR7 867 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 DHX37Q8IY37 1157 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 SRBD1Q8N5C6 995 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 IL31RAQ8NI17 732 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 FAM161BQ96MY7 647 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 NEK1Q96PY6 1258 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 IL23AQ9NPF7 189 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 STXBP5LQ9Y2K9 1186 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 SLC12A7Q9Y666 1083 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 FRMPD4Q14CM0 1322 aa9.79□□□□□ -0.84
HMGXB4-207ENST00000498212 GALR2O43603 387 aaPredicted RBP9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 FGBP02675 491 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 CYP2C9P11712 490 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 LAMC2Q13753 1193 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 KRT32Q14532 448 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 TSGA10IPQ3SY00 556 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 SYNE3Q6ZMZ3 975 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 SGMS1Q86VZ5 419 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 MICU3Q86XE3 530 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 RAB11FIP4Q86YS3 637 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 CMTR1Q8N1G2 835 aaKnown RBP9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 FANCBQ8NB91 859 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 PPTC7Q8NI37 304 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 SMARCC2Q8TAQ2 1214 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 PPP1R13LQ8WUF5 828 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 CUL5Q93034 780 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 EMID1Q96A84 441 aaPredicted RBP9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 ZFP91Q96JP5 570 aaPredicted RBP9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 KATNAL1Q9BW62 490 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 WNT8AQ9H1J5 351 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 MTIF3Q9H2K0 278 aaKnown RBP9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 PTPRSQ13332 1948 aa9.78□□□□□ -0.84
HMGXB4-207ENST00000498212 TMEM265A0A087WTH1 108 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 PIK3CDO00329 1044 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 MEIS2O14770 477 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 STAM2O75886 525 aa9.77□□□□□ -0.85
HMGXB4-207ENST00000498212 GGPS1O95749 300 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms