RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RASSF7Q02833 373 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 KIF22Q14807 665 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 EPC2Q52LR7 807 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 PRAMEF18Q5VWM3 479 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZNF585AQ6P3V2 769 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CMTR1Q8N1G2 835 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZGPATQ8N5A5 531 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 C12orf50Q8NA57 414 aaPredicted RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 SYTL5Q8TDW5 730 aaPredicted RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 KCTD4Q8WVF5 259 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 XAGE5Q8WWM1 108 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 LZTS2Q9BRK4 669 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZDHHC3Q9NYG2 299 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 TUBD1Q9UJT1 453 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RCAN3Q9UKA8 241 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 COL14A1Q05707 1796 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 PRSS38A1L453 326 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 EIF4E1BA6NMX2 242 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 NPIPA7E9PJI5 369 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 H0YGN5 161 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 STXBP3O00186 592 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ATP6V1G1O75348 118 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 NPIPA8P0DM63 369 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RAG1P15918 1043 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZKSCAN1P17029 563 aaPredicted RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 PRIM1P49642 420 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 CLCN3P51790 818 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 PPP2CAP67775 309 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ERV3-1Q14264 604 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 STAT4Q14765 748 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 NOLC1Q14978 699 aaKnown RBP eCLIP1.66□□□□□ -2.14
XRN1-214ENST00000498077 SYCP1Q15431 976 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 KIAA0319Q5VV43 1072 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ESRP1Q6NXG1 681 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZNF365Q70YC5 407 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 METTL16Q86W50 562 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 RPUSD2Q8IZ73 545 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 ADGRG2Q8IZP9 1017 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CARNMT1Q8N4J0 409 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 NSUN7Q8NE18 718 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 MPP4Q96JB8 637 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CYTH2Q99418 400 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 REEP2Q9BRK0 252 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 NPLQ9BXD5 320 aaPredicted RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 KRTAP9-9Q9BYP9 154 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 KRTAP9-4Q9BYQ2 154 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 SLC24A3Q9HC58 644 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 PRDM5Q9NQX1 630 aaPredicted RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 KLC4Q9NSK0 619 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CPA4Q9UI42 421 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ADAM29Q9UKF5 820 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 SLC4A7Q9Y6M7 1214 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 KIDINS220Q9ULH0 1771 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ADGRL2O95490 1459 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 SH3D21A4FU49 640 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GOLGA8AA7E2F4 631 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 TAF4O00268 1085 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RAB40ALP0C0E4 278 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ALADP13716 330 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 TIMP2P16035 220 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CHRM3P20309 590 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 UGT1A1P22309 533 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZBTB25P24278 435 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GATA4P43694 442 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CLCN4P51793 760 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RAB2AP61019 212 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 IRX6P78412 446 aaPredicted RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 PPFIA1Q13136 1202 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ARHGEF6Q15052 776 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 METTL21CQ5VZV1 264 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RETSATQ6NUM9 610 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 PRPF40BQ6NWY9 871 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 BZW1Q7L1Q6 419 aaKnown RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 DYMQ7RTS9 669 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 TPH2Q8IWU9 490 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CCDC65Q8IXS2 484 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZSWIM2Q8NEG5 633 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RHPN1Q8TCX5 695 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CABLES1Q8TDN4 633 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RHBDD1Q8TEB9 315 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GRK7Q8WTQ7 553 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 PHKBQ93100 1093 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 CCDC74AQ96AQ1 378 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 XAGE2Q96GT9 111 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ZFP42Q96MM3 310 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 NCAPGQ9BPX3 1015 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 KRTAP4-7Q9BYR0 210 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 KLHL11Q9NVR0 708 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 HAO1Q9UJM8 370 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RAB22AQ9UL26 194 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ADAMTS8Q9UP79 889 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 TRPM2O94759 1503 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 IGKV6D-41A0A0C4DH26 115 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 RSPH10B2B2RC85 870 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 FAM20BO75063 409 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 GADD45BO75293 160 aaPredicted RBP1.66□□□□□ -2.14
XRN1-214ENST00000498077 VSIG8P0DPA2 414 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 ITGA6P23229 1130 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 PSMC4P43686 418 aa1.66□□□□□ -2.14
XRN1-214ENST00000498077 MS4A2Q01362 244 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms