RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 WTAPQ15007 396 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 CCDC62Q6P9F0 684 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 AFG1LQ8WV93 481 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 SCLYQ96I15 445 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 GAS2L1Q99501 681 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 PCDHA1Q9Y5I3 950 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 SLC4A7Q9Y6M7 1214 aa13.66□□□□□ -0.22
NUDCD3-211ENST00000497978 KIAA1217Q5T5P2 1943 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 SGSM2O43147 1006 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 NR3C2P08235 984 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 MMP3P08254 477 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 ACTN1P12814 892 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 RFC2P35250 354 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 HSD17B4P51659 736 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 BFSP2Q13515 415 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 GRM4Q14833 912 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 CHST3Q7LGC8 479 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 HOMER1Q86YM7 354 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 MTMR8Q96EF0 704 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 MRVI1Q9Y6F6 885 aa13.65□□□□□ -0.22
NUDCD3-211ENST00000497978 E7EWF7 191 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 GHRHRQ02643 423 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 ARHGAP1Q07960 439 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 LAMC2Q13753 1193 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 DGKDQ16760 1214 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 KCNV1Q6PIU1 500 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 DEFB128Q7Z7B8 93 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 RIOX1Q9H6W3 641 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 SLC28A3Q9HAS3 691 aa13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
NUDCD3-211ENST00000497978 PNMA6FA0A0J9YX94 578 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 GCOM1H8Y6P7 765 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 OPLAHO14841 1288 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 PPP1R11O60927 126 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 POLR2MP0CAP2 368 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 PTGISQ16647 500 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 TMEM67Q5HYA8 995 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 PPP1R13LQ8WUF5 828 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 PIGSQ96S52 555 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 KATNAL1Q9BW62 490 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
NUDCD3-211ENST00000497978 IQCF3P0C7M6 154 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 ATP2A2P16615 1042 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 CCND2P30279 289 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 HOXA13P31271 388 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 PGM5Q15124 567 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 C7orf31Q8N865 590 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 RNF25Q96BH1 459 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 COL25A1Q9BXS0 654 aaPredicted RBP13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 PRDM12Q9H4Q4 367 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-211ENST00000497978 TGFB3P10600 412 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 KIF5BP33176 963 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 RABGGTBP53611 331 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 TROAPQ12815 778 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 VSIG10LQ86VR7 867 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 FCHSD1Q86WN1 690 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 IGDCC4Q8TDY8 1250 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 KAT2BQ92831 832 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 ALG1Q9BT22 464 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 SENP2Q9HC62 589 aa13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 YBX2Q9Y2T7 364 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-211ENST00000497978 A0A0C4DFX4 3053 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 CYTH3O43739 400 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 PPFIA4O75335 1185 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 DDAH1O94760 285 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 PARNO95453 639 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 PSEN2P49810 448 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 MFSD10Q14728 455 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 CELF3Q5SZQ8 465 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 GDF6Q6KF10 455 aaPredicted RBP13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 TMTC2Q8N394 836 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 VWCEQ96DN2 955 aa13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 RRP36Q96EU6 259 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-211ENST00000497978 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms