RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 MCF2L2Q86YR7 1114 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 MIB1Q86YT6 1006 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 SMARCC2Q8TAQ2 1214 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 C1orf159Q96HA4 380 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 ZNF408Q9H9D4 720 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 IGSF5Q9NSI5 407 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 NUDT5Q9UKK9 219 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 X6R8D5 127 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 OVOL3O00110 214 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 AKAP8O43823 692 aaKnown RBP5.12□□□□□ -1.59
PSPC1-205ENST00000497722 C8BP07358 591 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 SLC6A11P48066 632 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 NAALADL2Q58DX5 795 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 ZFYVE27Q5T4F4 411 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 ACBD5Q5T8D3 534 aaPredicted RBP5.12□□□□□ -1.59
PSPC1-205ENST00000497722 IQCEQ6IPM2 695 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 RIOX2Q8IUF8 465 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 TEX2Q8IWB9 1127 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 ZDHHC14Q8IZN3 488 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 GMLQ99445 158 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.12□□□□□ -1.59
PSPC1-205ENST00000497722 MARCH2Q9P0N8 246 aa5.12□□□□□ -1.59
PSPC1-205ENST00000497722 KCNC1P48547 511 aa5.11□□□□□ -1.59
PSPC1-205ENST00000497722 GFRA1P56159 465 aa5.11□□□□□ -1.59
PSPC1-205ENST00000497722 ARID5AQ03989 594 aa5.11□□□□□ -1.59
PSPC1-205ENST00000497722 LARP1BQ659C4 914 aaKnown RBP5.11□□□□□ -1.59
PSPC1-205ENST00000497722 ADAM7Q9H2U9 754 aa5.11□□□□□ -1.59
PSPC1-205ENST00000497722 FBXL7Q9UJT9 491 aa5.11□□□□□ -1.59
PSPC1-205ENST00000497722 FAN1Q9Y2M0 1017 aa5.11□□□□□ -1.59
PSPC1-205ENST00000497722 R3HCC1Q9Y3T6 440 aaKnown RBP5.11□□□□□ -1.59
PSPC1-205ENST00000497722 NPFFR2Q9Y5X5 522 aa5.11□□□□□ -1.59
PSPC1-205ENST00000497722 C22orf46C9J442 243 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 PRICKLE3O43900 615 aaPredicted RBP5.1□□□□□ -1.59
PSPC1-205ENST00000497722 NOBOXO60393 691 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 GJB6O95452 261 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 FPR2P25090 351 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 FXNQ16595 210 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 PRSS53Q2L4Q9 553 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 SV2CQ496J9 727 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 SLC35F1Q5T1Q4 408 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 DCP2Q8IU60 420 aaKnown RBP5.1□□□□□ -1.59
PSPC1-205ENST00000497722 CARFQ8N187 725 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 SLC43A3Q8NBI5 491 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 RCBTB1Q8NDN9 531 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 USP33Q8TEY7 942 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 CCDC140Q96MF4 163 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 GPR20Q99678 358 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 SYT3Q9BQG1 590 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 GORASP1Q9BQQ3 440 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 SPATA25Q9BR10 227 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 CDIP1Q9H305 208 aa5.1□□□□□ -1.59
PSPC1-205ENST00000497722 TIMM13Q9Y5L4 95 aaPredicted RBP5.1□□□□□ -1.59
PSPC1-205ENST00000497722 KLF4O43474 513 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 CPP00450 1065 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 BCL6P41182 706 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 GRIA2P42262 883 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 RPL11P62913 178 aaKnown RBP5.09□□□□□ -1.59
PSPC1-205ENST00000497722 PLP2Q04941 152 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 KCNAB2Q13303 367 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 SLC10A6Q3KNW5 377 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 MROH9Q5TGP6 573 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 CELF2-AS1Q8N7Q2 184 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 TMEM145Q8NBT3 493 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 SEC14L1Q92503 715 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 DIO2Q92813 273 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 PPP1R14AQ96A00 147 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 TANGO6Q9C0B7 1094 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 EPN3Q9H201 632 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 SRRDQ9UH36 339 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 PALD1Q9ULE6 856 aa5.09□□□□□ -1.59
PSPC1-205ENST00000497722 MEFVO15553 781 aaPredicted RBP5.08□□□□□ -1.6
PSPC1-205ENST00000497722 DDAH1O94760 285 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 SNRPB2P08579 225 aaKnown RBP5.08□□□□□ -1.6
PSPC1-205ENST00000497722 LCP1P13796 627 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 LTBRP36941 435 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 ECI1P42126 302 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 SF3A1Q15459 793 aaKnown RBP5.08□□□□□ -1.6
PSPC1-205ENST00000497722 CR1LQ2VPA4 569 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 PRR31Q5SQ13 230 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 ETV3LQ6ZN32 361 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 CEP68Q76N32 757 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 ZNF761Q86XN6 746 aaPredicted RBP5.08□□□□□ -1.6
PSPC1-205ENST00000497722 FAM126BQ8IXS8 530 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 FAM26EQ8N5C1 309 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 DDX11Q96FC9 970 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 C11orf84Q9BUA3 381 aaPredicted RBP5.08□□□□□ -1.6
PSPC1-205ENST00000497722 BDH2Q9BUT1 245 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 DUSP10Q9Y6W6 482 aa5.08□□□□□ -1.6
PSPC1-205ENST00000497722 A0A1W2PQU0 124 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 H7BY64 318 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 TADA3O75528 432 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 CYP2C8P10632 490 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 ATP2B1P20020 1258 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 THBS2P35442 1172 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 GTF2A2P52657 109 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 RTP5Q14D33 572 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 EMC4Q5J8M3 183 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 NT5DC1Q5TFE4 455 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 EEPD1Q7L9B9 569 aa5.07□□□□□ -1.6
PSPC1-205ENST00000497722 ZBTB8AQ96BR9 441 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms