RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	CCDC69	A6NI79	296 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	CDC45	O75419	566 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	CALM1	P0DP23	149 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	CALM2	P0DP24	149 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	CALM3	P0DP25	149 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	GNAQ	P50148	359 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	PTPN11	Q06124	597 aa	Predicted RBP	28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	RASIP1	Q5U651	963 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	NFXL1	Q6ZNB6	911 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	IL23A	Q9NPF7	189 aa		28.7	■■■□□ 2.18
HDAC10-219	ENST00000497483	TMEM265	A0A087WTH1	108 aa		28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	NBPF20	Q3BBV1	942 aa		28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	VSIG10L	Q86VR7	867 aa		28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	AFG1L	Q8WV93	481 aa		28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	RRP36	Q96EU6	259 aa	Known RBP	28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	WNT8A	Q9H1J5	351 aa		28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	TRMT13	Q9NUP7	481 aa	Known RBP	28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	MRVI1	Q9Y6F6	885 aa		28.69	■■■□□ 2.18
HDAC10-219	ENST00000497483	RGS20	O76081	388 aa		28.68	■■■□□ 2.18
HDAC10-219	ENST00000497483	KCNV1	Q6PIU1	500 aa		28.68	■■■□□ 2.18
HDAC10-219	ENST00000497483	SGMS1	Q86VZ5	419 aa		28.68	■■■□□ 2.18
HDAC10-219	ENST00000497483	IL31RA	Q8NI17	732 aa		28.68	■■■□□ 2.18
HDAC10-219	ENST00000497483	GUCD1	Q96NT3	240 aa		28.68	■■■□□ 2.18
HDAC10-219	ENST00000497483	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	28.67	■■■□□ 2.18
HDAC10-219	ENST00000497483	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	28.67	■■■□□ 2.18
HDAC10-219	ENST00000497483	SEC63	Q9UGP8	760 aa	Known RBP	28.67	■■■□□ 2.18
HDAC10-219	ENST00000497483	PLEKHA8P1	O95397	391 aa		28.66	■■■□□ 2.18
HDAC10-219	ENST00000497483	MYCL	P12524	364 aa	Predicted RBP	28.66	■■■□□ 2.18
HDAC10-219	ENST00000497483	CCND2	P30279	289 aa		28.66	■■■□□ 2.18
HDAC10-219	ENST00000497483	TSGA10IP	Q3SY00	556 aa		28.66	■■■□□ 2.18
HDAC10-219	ENST00000497483	SCN5A	Q14524	2016 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	ACR	P10323	421 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	LAMC2	Q13753	1193 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	DGKD	Q16760	1214 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	FAM47C	Q5HY64	1035 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	ZNF365	Q70YC5	407 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	SESTD1	Q86VW0	696 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	FCHSD1	Q86WN1	690 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	SRBD1	Q8N5C6	995 aa	Known RBP	28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	PPTC7	Q8NI37	304 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	CCDC136	Q96JN2	1154 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	SLC12A7	Q9Y666	1083 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	GBF1	Q92538	1859 aa		28.65	■■■□□ 2.18
HDAC10-219	ENST00000497483	PIK3CD	O00329	1044 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	TGFB3	P10600	412 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	CYP2C9	P11712	490 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	HOXD8	P13378	290 aa	Predicted RBP	28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	CAST	P20810	708 aa	Known RBP	28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	CCL23	P55773	120 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	PIBF1	Q8WXW3	757 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	HERVK_113	Q902F9	699 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	NEK1	Q96PY6	1258 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	LRRC2	Q9BYS8	371 aa		28.64	■■■□□ 2.18
HDAC10-219	ENST00000497483	STAM2	O75886	525 aa		28.63	■■■□□ 2.17
HDAC10-219	ENST00000497483	RXRA	P19793	462 aa		28.63	■■■□□ 2.17
HDAC10-219	ENST00000497483	KAT2B	Q92831	832 aa		28.63	■■■□□ 2.17
HDAC10-219	ENST00000497483	FAM161B	Q96MY7	647 aa		28.63	■■■□□ 2.17
HDAC10-219	ENST00000497483	TTYH1	Q9H313	450 aa	Predicted RBP	28.63	■■■□□ 2.17
HDAC10-219	ENST00000497483	SEMA6B	Q9H3T3	888 aa		28.63	■■■□□ 2.17
HDAC10-219	ENST00000497483	PITPNM1	O00562	1244 aa		28.62	■■■□□ 2.17
HDAC10-219	ENST00000497483	TMTC3	Q6ZXV5	915 aa		28.62	■■■□□ 2.17
HDAC10-219	ENST00000497483	DHX37	Q8IY37	1157 aa	Known RBP	28.62	■■■□□ 2.17
HDAC10-219	ENST00000497483	FANCB	Q8NB91	859 aa		28.62	■■■□□ 2.17
HDAC10-219	ENST00000497483	KATNAL1	Q9BW62	490 aa		28.62	■■■□□ 2.17
HDAC10-219	ENST00000497483	MTIF3	Q9H2K0	278 aa	Known RBP	28.62	■■■□□ 2.17
HDAC10-219	ENST00000497483	DOCK5	Q9H7D0	1870 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	TRIP12	Q14669	1992 aa	Predicted RBP	28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	F2	P00734	622 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	FGB	P02675	491 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	PFKM	P08237	780 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	UBA1	P22314	1058 aa	Known RBP	28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	DNAJB2	P25686	324 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	EXOSC10	Q01780	885 aa	Known RBP	28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	KRT32	Q14532	448 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	CELF3	Q5SZQ8	465 aa	Known RBP	28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	MYSM1	Q5VVJ2	828 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	APOA5	Q6Q788	366 aa		28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	RPUSD2	Q8IZ73	545 aa	Known RBP	28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	INPP4A	Q96PE3	977 aa	Predicted RBP	28.61	■■■□□ 2.17
HDAC10-219	ENST00000497483	MEIS2	O14770	477 aa		28.6	■■■□□ 2.17
HDAC10-219	ENST00000497483	DHX32	Q7L7V1	743 aa	Known RBP	28.6	■■■□□ 2.17
HDAC10-219	ENST00000497483	MICU3	Q86XE3	530 aa		28.6	■■■□□ 2.17
HDAC10-219	ENST00000497483	RASEF	Q8IZ41	740 aa		28.6	■■■□□ 2.17
HDAC10-219	ENST00000497483	CUL5	Q93034	780 aa		28.6	■■■□□ 2.17
HDAC10-219	ENST00000497483	VWCE	Q96DN2	955 aa		28.6	■■■□□ 2.17
HDAC10-219	ENST00000497483	SCLY	Q96I15	445 aa		28.6	■■■□□ 2.17
HDAC10-219	ENST00000497483	GGPS1	O95749	300 aa		28.59	■■■□□ 2.17
HDAC10-219	ENST00000497483	ICAM3	P32942	547 aa		28.59	■■■□□ 2.17
HDAC10-219	ENST00000497483	MRPS9	P82933	396 aa	Known RBP	28.59	■■■□□ 2.17
HDAC10-219	ENST00000497483	GNPTAB	Q3T906	1256 aa		28.59	■■■□□ 2.17
HDAC10-219	ENST00000497483	CMTR1	Q8N1G2	835 aa	Known RBP	28.59	■■■□□ 2.17
HDAC10-219	ENST00000497483	SMARCC2	Q8TAQ2	1214 aa		28.59	■■■□□ 2.17
HDAC10-219	ENST00000497483	PPP1R13L	Q8WUF5	828 aa		28.59	■■■□□ 2.17
HDAC10-219	ENST00000497483	HAS3	O00219	553 aa		28.58	■■■□□ 2.17
HDAC10-219	ENST00000497483	RFC2	P35250	354 aa		28.58	■■■□□ 2.17
HDAC10-219	ENST00000497483	SP2	Q02086	613 aa		28.58	■■■□□ 2.17
HDAC10-219	ENST00000497483	BFSP2	Q13515	415 aa		28.58	■■■□□ 2.17
HDAC10-219	ENST00000497483	ADCK5	Q3MIX3	580 aa		28.58	■■■□□ 2.17
HDAC10-219	ENST00000497483	XRRA1	Q6P2D8	792 aa		28.58	■■■□□ 2.17
HDAC10-219	ENST00000497483	USP17L6P	Q6QN14	398 aa		28.58	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms