RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 GOLGA8BA8MQT2 603 aa21.55■■□□□ 1.04
RPN1-208ENST00000497415 RGS20O76081 388 aa21.55■■□□□ 1.04
RPN1-208ENST00000497415 CASTP20810 708 aaKnown RBP21.55■■□□□ 1.04
RPN1-208ENST00000497415 FGD1P98174 961 aa21.55■■□□□ 1.04
RPN1-208ENST00000497415 IL31RAQ8NI17 732 aa21.55■■□□□ 1.04
RPN1-208ENST00000497415 BRF1Q92994 677 aa21.55■■□□□ 1.04
RPN1-208ENST00000497415 UBE2OQ9C0C9 1292 aaKnown RBP21.55■■□□□ 1.04
RPN1-208ENST00000497415 DDX41Q9UJV9 622 aaKnown RBP21.55■■□□□ 1.04
RPN1-208ENST00000497415 NID2Q14112 1375 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 hCG_1642624A0A1W2PR95 340 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
RPN1-208ENST00000497415 CDC27P30260 824 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 PURAQ00577 322 aaKnown RBP21.54■■□□□ 1.04
RPN1-208ENST00000497415 APOBRQ0VD83 1088 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 ITGA7Q13683 1181 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 LY6KQ17RY6 165 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 BRDTQ58F21 947 aaPredicted RBP21.54■■□□□ 1.04
RPN1-208ENST00000497415 USP17L6PQ6QN14 398 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 FAM126BQ8IXS8 530 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 ZSWIM6Q9HCJ5 1215 aa21.54■■□□□ 1.04
RPN1-208ENST00000497415 MYH7BA7E2Y1 1941 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 KPNA6O60684 536 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 SLC34A2O95436 690 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 GH1P01241 217 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 ITGB8P26012 769 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 CCND2P30279 289 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 ARHGAP1Q07960 439 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 CUL5Q93034 780 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 TM6SF1Q9BZW5 370 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 TMEM39AQ9NV64 488 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 TBX21Q9UL17 535 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 SCN10AQ9Y5Y9 1956 aa21.53■■□□□ 1.04
RPN1-208ENST00000497415 CD4P01730 458 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 EVCP57679 992 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 KCNV1Q6PIU1 500 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 RUFY3Q7L099 469 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 TDHQ8IZJ6 230 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 BADQ92934 168 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 EMID1Q96A84 441 aaPredicted RBP21.52■■□□□ 1.04
RPN1-208ENST00000497415 MTG1Q9BT17 334 aaPredicted RBP21.52■■□□□ 1.04
RPN1-208ENST00000497415 PSTPIP2Q9H939 334 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 MRVI1Q9Y6F6 885 aa21.52■■□□□ 1.04
RPN1-208ENST00000497415 CCDC196A0A1B0GTZ2 297 aa21.51■■□□□ 1.03
RPN1-208ENST00000497415 TLR3O15455 904 aaKnown RBP21.51■■□□□ 1.03
RPN1-208ENST00000497415 STAM2O75886 525 aa21.51■■□□□ 1.03
RPN1-208ENST00000497415 MYL3P08590 195 aa21.51■■□□□ 1.03
RPN1-208ENST00000497415 TGFB3P10600 412 aa21.51■■□□□ 1.03
RPN1-208ENST00000497415 ADD1P35611 737 aaKnown RBP21.51■■□□□ 1.03
RPN1-208ENST00000497415 METAP2P50579 478 aaKnown RBP eCLIP21.51■■□□□ 1.033e-7■□□□□ 9.8
RPN1-208ENST00000497415 PSMC6P62333 389 aa21.51■■□□□ 1.03
RPN1-208ENST00000497415 MRPS9P82933 396 aaKnown RBP21.51■■□□□ 1.03
RPN1-208ENST00000497415 WWC2Q6AWC2 1192 aa21.51■■□□□ 1.03
RPN1-208ENST00000497415 GPKOWQ92917 476 aaPredicted RBP eCLIP21.51■■□□□ 1.032e-11■□□□□ 9.7
RPN1-208ENST00000497415 V9GY48 417 aaPredicted RBP21.51■■□□□ 1.03
RPN1-208ENST00000497415 RAG1P15918 1043 aa21.5■■□□□ 1.03
RPN1-208ENST00000497415 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
RPN1-208ENST00000497415 HEATR3Q7Z4Q2 680 aa21.5■■□□□ 1.03
RPN1-208ENST00000497415 TEX2Q8IWB9 1127 aa21.5■■□□□ 1.03
RPN1-208ENST00000497415 AFG1LQ8WV93 481 aa21.5■■□□□ 1.03
RPN1-208ENST00000497415 NAP1L2Q9ULW6 460 aaPredicted RBP21.5■■□□□ 1.03
RPN1-208ENST00000497415 hCG_1984214I3L0E3 225 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 MMP3P08254 477 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 ICAM3P32942 547 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 LAMC2Q13753 1193 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 LRIT3Q3SXY7 679 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 PCNX4Q63HM2 1172 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 TYW1BQ6NUM6 668 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 PPP1R18Q6NYC8 613 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 ZNF713Q8N859 430 aaPredicted RBP21.49■■□□□ 1.03
RPN1-208ENST00000497415 ZFP91Q96JP5 570 aaPredicted RBP21.49■■□□□ 1.03
RPN1-208ENST00000497415 INPP4AQ96PE3 977 aaPredicted RBP21.49■■□□□ 1.03
RPN1-208ENST00000497415 CYP46A1Q9Y6A2 500 aa21.49■■□□□ 1.03
RPN1-208ENST00000497415 TIMP1P01033 207 aa21.48■■□□□ 1.03
RPN1-208ENST00000497415 SP2Q02086 613 aa21.48■■□□□ 1.03
RPN1-208ENST00000497415 TOB2Q14106 344 aaPredicted RBP21.48■■□□□ 1.03
RPN1-208ENST00000497415 MYSM1Q5VVJ2 828 aa21.48■■□□□ 1.03
RPN1-208ENST00000497415 STXBP3O00186 592 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 B4GALT4O60513 344 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 PDIA3P30101 505 aaKnown RBP21.47■■□□□ 1.03
RPN1-208ENST00000497415 NAPAP54920 295 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 UBE2SQ16763 222 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 GNPTABQ3T906 1256 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 CELF3Q5SZQ8 465 aaKnown RBP21.47■■□□□ 1.03
RPN1-208ENST00000497415 DHX37Q8IY37 1157 aaKnown RBP21.47■■□□□ 1.03
RPN1-208ENST00000497415 PPTC7Q8NI37 304 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 ALDH8A1Q9H2A2 487 aaPredicted RBP21.47■■□□□ 1.03
RPN1-208ENST00000497415 RIC8AQ9NPQ8 531 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 BARHL2Q9NY43 387 aa21.47■■□□□ 1.03
RPN1-208ENST00000497415 SPATA31C2B4DYI2 1134 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 SOX1O00570 391 aaPredicted RBP21.46■■□□□ 1.03
RPN1-208ENST00000497415 GGPS1O95749 300 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 HOXD8P13378 290 aaPredicted RBP21.46■■□□□ 1.03
RPN1-208ENST00000497415 UBA1P22314 1058 aaKnown RBP21.46■■□□□ 1.03
RPN1-208ENST00000497415 SEMA3FQ13275 785 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 NTRK3Q16288 839 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 DGKDQ16760 1214 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 PFKFB3Q16875 520 aaPredicted RBP21.46■■□□□ 1.03
RPN1-208ENST00000497415 NBPF20Q3BBV1 942 aa21.46■■□□□ 1.03
RPN1-208ENST00000497415 MFSD5Q6N075 450 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms