RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	RGS19	P49795	217 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	MRPL12	P52815	198 aa	Known RBP	9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	AP3B2	Q13367	1082 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	LRRC41	Q15345	812 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	JAKMIP3	Q5VZ66	844 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	PCNX4	Q63HM2	1172 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	CCDC62	Q6P9F0	684 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	SEPT14	Q6ZU15	432 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	TLK2	Q86UE8	772 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	VSIG10L	Q86VR7	867 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	CCDC12	Q8WUD4	166 aa	Predicted RBP	9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	COPS5	Q92905	334 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	TMX3	Q96JJ7	454 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	INPP4A	Q96PE3	977 aa	Predicted RBP	9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	MPHOSPH6	Q99547	160 aa	Known RBP	9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	ALG1	Q9BT22	464 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	UPF3A	Q9H1J1	476 aa	Known RBP	9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	SH3GLB2	Q9NR46	395 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	KCNJ14	Q9UNX9	436 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	KIAA0100	Q14667	2235 aa	Known RBP	9.21	□□□□□ -0.93
EFNA1-205	ENST00000497282		B4DLN1	442 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282		M0R2N6	131 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	DNM1L	O00429	736 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	EDIL3	O43854	480 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	EIF3J	O75822	258 aa	Known RBP	9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	COL6A1	P12109	1028 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	CST5	P28325	142 aa	Predicted RBP	9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	SREBF1	P36956	1147 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	FOSB	P53539	338 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	GJA9	P57773	515 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	NLRP5	P59047	1200 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	SEMA3F	Q13275	785 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	DUSP28	Q4G0W2	176 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	IQSEC1	Q6DN90	963 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	CCSAP	Q6IQ19	270 aa	Predicted RBP	9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	TEX2	Q8IWB9	1127 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	REXO1	Q8N1G1	1221 aa	Known RBP	9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	ANKLE1	Q8NAG6	615 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	DAGLB	Q8NCG7	672 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	KLHDC9	Q8NEP7	349 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	SCFD2	Q8WU76	684 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	CRYGN	Q8WXF5	182 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	PAWR	Q96IZ0	340 aa	Known RBP	9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	PHF20	Q9BVI0	1012 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	WDR11	Q9BZH6	1224 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	C6orf50	Q9HD87	102 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	RTEL1	Q9NZ71	1219 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	PCDHA4	Q9UN74	947 aa		9.21	□□□□□ -0.94
EFNA1-205	ENST00000497282	FOS	P01100	380 aa	Predicted RBP	9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	MYCN	P04198	464 aa	Predicted RBP	9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	C6orf222	P0C671	652 aa	Predicted RBP	9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	TXN	P10599	105 aa	Known RBP	9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	ITGB5	P18084	799 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	UBA1	P22314	1058 aa	Known RBP	9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	GNA11	P29992	359 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	NKX3-2	P78367	333 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	BEX3	Q00994	111 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	SP2	Q02086	613 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	ARHGAP1	Q07960	439 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	TTLL4	Q14679	1199 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	LY6K	Q17RY6	165 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	BLID	Q8IZY5	108 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	IL27	Q8NEV9	243 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	OXER1	Q8TDS5	423 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	LLPH	Q9BRT6	129 aa	Known RBP	9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	GLT8D2	Q9H1C3	349 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	BCAS3	Q9H6U6	928 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	DDX41	Q9UJV9	622 aa	Known RBP	9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	UBIAD1	Q9Y5Z9	338 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	MRVI1	Q9Y6F6	885 aa		9.2	□□□□□ -0.94
EFNA1-205	ENST00000497282	IGLV3-22	A0A075B6J6	115 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	FAM205C	A6NFA0	338 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	KBTBD13	C9JR72	458 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	NKRF	O15226	690 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	DYNC1LI2	O43237	492 aa	Predicted RBP	9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	FIBP	O43427	364 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	STAM2	O75886	525 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	CAPN2	P17655	700 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	ICAM3	P32942	547 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	MCM2	P49736	904 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	ARHGAP4	P98171	946 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	EARS2	Q5JPH6	523 aa	Known RBP	9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	KRT40	Q6A162	431 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	XRRA1	Q6P2D8	792 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	RNF180	Q86T96	592 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	FAM177A1	Q8N128	213 aa	Predicted RBP	9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	ARRDC4	Q8NCT1	418 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	OR6J1	Q8NGC5	347 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	CYP2W1	Q8TAV3	490 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	BICD2	Q8TD16	824 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	WASF1	Q92558	559 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	C11orf49	Q9H6J7	331 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	EHMT1	Q9H9B1	1298 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	PHF24	Q9UPV7	400 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282		Q9Y3F1	56 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282	TELO2	Q9Y4R8	837 aa		9.19	□□□□□ -0.94
EFNA1-205	ENST00000497282		A0A1W2PQ45	241 aa	Predicted RBP	9.18	□□□□□ -0.94
EFNA1-205	ENST00000497282		A0A1W2PQY0	241 aa		9.18	□□□□□ -0.94
EFNA1-205	ENST00000497282	SPATA31C2	B4DYI2	1134 aa		9.18	□□□□□ -0.94
EFNA1-205	ENST00000497282	FAM86B1	E9PN63	330 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms