RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 ALDH8A1Q9H2A2 487 aaPredicted RBP22.59■■□□□ 1.21
COL20A1-208ENST00000496810 DDX41Q9UJV9 622 aaKnown RBP22.59■■□□□ 1.21
COL20A1-208ENST00000496810 PRUNE2Q8WUY3 3088 aa22.59■■□□□ 1.21
COL20A1-208ENST00000496810 RBAK-RBAKDNI3L0D1 243 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 MMP3P08254 477 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 CPA1P15085 419 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 RNF20Q5VTR2 975 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 GPR153Q6NV75 609 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 SGMS1Q86VZ5 419 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 RRP36Q96EU6 259 aaKnown RBP22.58■■□□□ 1.21
COL20A1-208ENST00000496810 RNPC3Q96LT9 517 aaKnown RBP22.58■■□□□ 1.21
COL20A1-208ENST00000496810 NEK1Q96PY6 1258 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.58■■□□□ 1.21
COL20A1-208ENST00000496810 NOC4LQ9BVI4 516 aaKnown RBP22.58■■□□□ 1.21
COL20A1-208ENST00000496810 WNT8AQ9H1J5 351 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 BRPF3Q9ULD4 1205 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 SLC12A7Q9Y666 1083 aa22.58■■□□□ 1.21
COL20A1-208ENST00000496810 TRIP12Q14669 1992 aaPredicted RBP22.58■■□□□ 1.2
COL20A1-208ENST00000496810 FRMPD4Q14CM0 1322 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 EIF3JO75822 258 aaKnown RBP22.57■■□□□ 1.2
COL20A1-208ENST00000496810 GH1P01241 217 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 ACRP10323 421 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 EXOSC10Q01780 885 aaKnown RBP22.57■■□□□ 1.2
COL20A1-208ENST00000496810 NBPF20Q3BBV1 942 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 TMTC3Q6ZXV5 915 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 CCDC82Q8N4S0 544 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 HIPK3Q9H422 1215 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 MRVI1Q9Y6F6 885 aa22.57■■□□□ 1.2
COL20A1-208ENST00000496810 CYP2C9P11712 490 aa22.56■■□□□ 1.2
COL20A1-208ENST00000496810 FAM47CQ5HY64 1035 aa22.56■■□□□ 1.2
COL20A1-208ENST00000496810 FAM109BQ6ICB4 259 aaPredicted RBP22.56■■□□□ 1.2
COL20A1-208ENST00000496810 APOA5Q6Q788 366 aa22.56■■□□□ 1.2
COL20A1-208ENST00000496810 USP17L6PQ6QN14 398 aa22.56■■□□□ 1.2
COL20A1-208ENST00000496810 VSIG10LQ86VR7 867 aa22.56■■□□□ 1.2
COL20A1-208ENST00000496810 MAP3K20Q9NYL2 800 aaKnown RBP22.56■■□□□ 1.2
COL20A1-208ENST00000496810 CHD7Q9P2D1 2997 aa22.56■■□□□ 1.2
COL20A1-208ENST00000496810 CNTNAP5Q8WYK1 1306 aa22.56■■□□□ 1.2
COL20A1-208ENST00000496810 A0A0C4DFX4 3053 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 CCL23P55773 120 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 CHMP4BP1P59074 171 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 MRPS9P82933 396 aaKnown RBP22.55■■□□□ 1.2
COL20A1-208ENST00000496810 SP2Q02086 613 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 TSGA10IPQ3SY00 556 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 TMTC2Q8N394 836 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 FANCBQ8NB91 859 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 KAT2BQ92831 832 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 VWCEQ96DN2 955 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 FAM161BQ96MY7 647 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 BCAS3Q9H6U6 928 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 MTMR10Q9NXD2 777 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 TET1Q8NFU7 2136 aa22.55■■□□□ 1.2
COL20A1-208ENST00000496810 MEIS2O14770 477 aa22.54■■□□□ 1.2
COL20A1-208ENST00000496810 ZNF286BP0CG31 522 aa22.54■■□□□ 1.2
COL20A1-208ENST00000496810 UBA1P22314 1058 aaKnown RBP22.54■■□□□ 1.2
COL20A1-208ENST00000496810 SMARCA1P28370 1054 aa22.54■■□□□ 1.2
COL20A1-208ENST00000496810 BRDTQ58F21 947 aaPredicted RBP22.54■■□□□ 1.2
COL20A1-208ENST00000496810 TMEM240Q5SV17 173 aa22.54■■□□□ 1.2
COL20A1-208ENST00000496810 DHX32Q7L7V1 743 aaKnown RBP22.54■■□□□ 1.2
COL20A1-208ENST00000496810 LZTS2Q9BRK4 669 aa22.54■■□□□ 1.2
COL20A1-208ENST00000496810 SEC63Q9UGP8 760 aaKnown RBP22.54■■□□□ 1.2
COL20A1-208ENST00000496810 CALM1P0DP23 149 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 CALM2P0DP24 149 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 CALM3P0DP25 149 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 CCND2P30279 289 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 GNAQP50148 359 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 TRAF1Q13077 416 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 PPIGQ13427 754 aaKnown RBP eCLIP22.53■■□□□ 1.2
COL20A1-208ENST00000496810 SAMD3Q8N6K7 520 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 KCNB2Q92953 911 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 EMID1Q96A84 441 aaPredicted RBP22.53■■□□□ 1.2
COL20A1-208ENST00000496810 SCLYQ96I15 445 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 GUCD1Q96NT3 240 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 CTAGE1Q96RT6 745 aa22.53■■□□□ 1.2
COL20A1-208ENST00000496810 NEFLP07196 543 aa22.52■■□□□ 1.2
COL20A1-208ENST00000496810 SEMA3FQ13275 785 aa22.52■■□□□ 1.2
COL20A1-208ENST00000496810 UBE2SQ16763 222 aa22.52■■□□□ 1.2
COL20A1-208ENST00000496810 ZNF365Q70YC5 407 aa22.52■■□□□ 1.2
COL20A1-208ENST00000496810 TMEM199Q8N511 208 aa22.52■■□□□ 1.2
COL20A1-208ENST00000496810 TELO2Q9Y4R8 837 aa22.52■■□□□ 1.2
COL20A1-208ENST00000496810 SNX14Q9Y5W7 946 aa22.52■■□□□ 1.2
COL20A1-208ENST00000496810 KPNA6O60684 536 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 GGPS1O95749 300 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 HSPA4P34932 840 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 FUT2Q10981 343 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 HSDL1Q3SXM5 330 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 MYSM1Q5VVJ2 828 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 TYW1BQ6NUM6 668 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 NFRKBQ6P4R8 1299 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 SEZ6LQ9BYH1 1024 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 TTYH1Q9H313 450 aaPredicted RBP22.51■■□□□ 1.19
COL20A1-208ENST00000496810 IL23AQ9NPF7 189 aa22.51■■□□□ 1.19
COL20A1-208ENST00000496810 CXXC1Q9P0U4 656 aaPredicted RBP22.51■■□□□ 1.19
COL20A1-208ENST00000496810 KLF18A0A0U1RQI7 1052 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 PIK3CDO00329 1044 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 SMAD3P84022 425 aaKnown RBP22.5■■□□□ 1.19
COL20A1-208ENST00000496810 RTN1Q16799 776 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 CELF3Q5SZQ8 465 aaKnown RBP22.5■■□□□ 1.19
COL20A1-208ENST00000496810 RASIP1Q5U651 963 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 WWC2Q6AWC2 1192 aa22.5■■□□□ 1.19
COL20A1-208ENST00000496810 GDF6Q6KF10 455 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms