RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 AP3B2Q13367 1082 aa23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 LRRC41Q15345 812 aa23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 DUSP28Q4G0W2 176 aa23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 GJC2Q5T442 439 aaPredicted RBP23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 CCDC83Q8IWF9 413 aa23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 PAWRQ96IZ0 340 aaKnown RBP23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 GNEQ9Y223 722 aaKnown RBP23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 Q9Y3F1 56 aa23.15■■□□□ 1.3
TSC22D4-206ENST00000496728 SYNRGQ9UMZ2 1314 aa23.14■■□□□ 1.3
TSC22D4-206ENST00000496728 NKRFO15226 690 aaKnown RBP eCLIP23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 DYNC1LI2O43237 492 aaPredicted RBP23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 TXNP10599 105 aaKnown RBP23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 GJA9P57773 515 aa23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 MLLT1Q03111 559 aaPredicted RBP23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 PCNX4Q63HM2 1172 aa23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 UBE2Q1Q7Z7E8 422 aa23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 TLK2Q86UE8 772 aa23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 NSUN7Q8NE18 718 aaKnown RBP23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 DIS3LQ8TF46 1054 aaKnown RBP23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 AIFM3Q96NN9 605 aa23.14■■□□□ 1.29
TSC22D4-206ENST00000496728 MCM3APO60318 1980 aa23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 ADAMTS4O75173 837 aa23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 C6orf222P0C671 652 aaPredicted RBP23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 CLK2P49760 499 aaKnown RBP23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 MNX1P50219 401 aaPredicted RBP23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 GNPTABQ3T906 1256 aa23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 KCNV1Q6PIU1 500 aa23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 REXO1Q8N1G1 1221 aaKnown RBP23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 LLPHQ9BRT6 129 aaKnown RBP23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 UPF3AQ9H1J1 476 aaKnown RBP23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 C11orf49Q9H6J7 331 aa23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 TMEM260Q9NX78 707 aa23.13■■□□□ 1.29
TSC22D4-206ENST00000496728 DTNBO60941 627 aa23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 MRPS9P82933 396 aaKnown RBP23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 JAKMIP3Q5VZ66 844 aa23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 GALNT17Q6IS24 598 aa23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 ZFP91Q96JP5 570 aaPredicted RBP23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 ALG1Q9BT22 464 aa23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 ANO3Q9BYT9 981 aa23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 RTEL1Q9NZ71 1219 aa23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 MRVI1Q9Y6F6 885 aa23.12■■□□□ 1.29
TSC22D4-206ENST00000496728 ST3GAL1Q11201 340 aa23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 GNASQ5JWF2 1037 aa23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 TMEM63BQ5T3F8 832 aa23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 CCDC62Q6P9F0 684 aa23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 KLHDC9Q8NEP7 349 aa23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 PGBD1Q96JS3 809 aa23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 TSEN34Q9BSV6 310 aaKnown RBP23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 PCDHA4Q9UN74 947 aa23.11■■□□□ 1.29
TSC22D4-206ENST00000496728 JAK2O60674 1132 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 RGS20O76081 388 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 ARIH2O95376 493 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 TGFB3P10600 412 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 FDPSP14324 419 aaKnown RBP23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 CST5P28325 142 aaPredicted RBP23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 NKX3-2P78367 333 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 LY6KQ17RY6 165 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 NLRX1Q86UT6 975 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 PCSK9Q8NBP7 692 aaKnown RBP23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 OR6J1Q8NGC5 347 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 INPP4AQ96PE3 977 aaPredicted RBP23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 HTATIP2Q9BUP3 242 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 SENP6Q9GZR1 1112 aaPredicted RBP23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 BRCA2P51587 3418 aa23.1■■□□□ 1.29
TSC22D4-206ENST00000496728 ZEB2O60315 1214 aa23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 GH1P01241 217 aa23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 COL6A1P12109 1028 aa23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 KCNA10Q16322 511 aa23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 FSCN1Q16658 493 aaKnown RBP23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 BRDTQ58F21 947 aaPredicted RBP23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 BLIDQ8IZY5 108 aa23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 COPS5Q92905 334 aa23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 TMX3Q96JJ7 454 aa23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 DDX41Q9UJV9 622 aaKnown RBP23.09■■□□□ 1.29
TSC22D4-206ENST00000496728 MYADML2A6NDP7 307 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 MOXD2PA6NHM9 499 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 FIBPO43427 364 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 CD2BP2O95400 341 aaKnown RBP23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 PTGS1P23219 599 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 SREBF1P36956 1147 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 HMGN5P82970 282 aaKnown RBP23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 TRIM29Q14134 588 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 DAGLBQ8NCG7 672 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 RASGRP4Q8TDF6 673 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 PHF20Q9BVI0 1012 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 KCNJ14Q9UNX9 436 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 PHF24Q9UPV7 400 aa23.08■■□□□ 1.29
TSC22D4-206ENST00000496728 ADAMTS3O15072 1205 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 ICAM3P32942 547 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 CPT1AP50416 773 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 ACLYP53396 1101 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 IRX5P78411 483 aaPredicted RBP23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 ARHGAP4P98171 946 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 BEX3Q00994 111 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 CCSAPQ6IQ19 270 aaPredicted RBP23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 DHX37Q8IY37 1157 aaKnown RBP23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 CDHR1Q96JP9 859 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 UBIAD1Q9Y5Z9 338 aa23.07■■□□□ 1.28
TSC22D4-206ENST00000496728 LRRC37A2A6NM11 1700 aa23.06■■□□□ 1.28
TSC22D4-206ENST00000496728 SPATA31C2B4DYI2 1134 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms