RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 B4GALT3O60512 393 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 FUCA1P04066 466 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 SEPHS1P49903 392 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 ARID5AQ03989 594 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 RBBP8NLQ8NC74 664 aaPredicted RBP5.82□□□□□ -1.48
CLK1-214ENST00000496205 PLEKHO2Q8TD55 490 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 UBXN4Q92575 508 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 DNAJC2Q99543 621 aaKnown RBP5.82□□□□□ -1.48
CLK1-214ENST00000496205 HAUS7Q99871 368 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 ZNF747Q9BV97 191 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 KLHL25Q9H0H3 589 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 CD248Q9HCU0 757 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLK1-214ENST00000496205 WHRNQ9P202 907 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 CYR61O00622 381 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 SGSM2O43147 1006 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 NASPP49321 788 aaPredicted RBP5.81□□□□□ -1.48
CLK1-214ENST00000496205 ITGA1P56199 1179 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 FBXW10Q5XX13 1052 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 BORAQ6PGQ7 559 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 CD300LDQ6UXZ3 194 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 ETV3LQ6ZN32 361 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 FAM124AQ86V42 546 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 DPF3Q92784 378 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 KISS1RQ969F8 398 aaPredicted RBP5.81□□□□□ -1.48
CLK1-214ENST00000496205 FGD4Q96M96 766 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 EFR3BQ9Y2G0 817 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 BACE2Q9Y5Z0 518 aa5.81□□□□□ -1.48
CLK1-214ENST00000496205 PAMP19021 973 aa5.8□□□□□ -1.48
CLK1-214ENST00000496205 GTF2F1P35269 517 aaKnown RBP eCLIP5.8□□□□□ -1.48
CLK1-214ENST00000496205 GNL2Q13823 731 aaKnown RBP5.8□□□□□ -1.48
CLK1-214ENST00000496205 MBLAC2Q68D91 279 aa5.8□□□□□ -1.48
CLK1-214ENST00000496205 MIB1Q86YT6 1006 aa5.8□□□□□ -1.48
CLK1-214ENST00000496205 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.8□□□□□ -1.488e-10■□□□□ 10.6
CLK1-214ENST00000496205 NPHP3-ACAD11A0A0J9YXS1 232 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 GPR42O15529 346 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 LAMTOR5O43504 91 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 NPHS1O60500 1241 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 AMHP03971 560 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 ATP2B1P20020 1258 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 SOX9P48436 509 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 ARHGEF39Q8N4T4 335 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 TTLL6Q8N841 843 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 LCORQ96JN0 433 aaPredicted RBP5.79□□□□□ -1.48
CLK1-214ENST00000496205 KLC2Q9H0B6 622 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 SLITRK6Q9H5Y7 841 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 PCDH18Q9HCL0 1135 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 CGGBP1Q9UFW8 167 aaPredicted RBP5.79□□□□□ -1.48
CLK1-214ENST00000496205 PCDHB10Q9UN67 800 aa5.79□□□□□ -1.48
CLK1-214ENST00000496205 FZD7O75084 574 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 EPHX1P07099 455 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 STAT5AP42229 794 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 AMPD2Q01433 879 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 GNPTABQ3T906 1256 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 HEATR6Q6AI08 1181 aaKnown RBP5.78□□□□□ -1.48
CLK1-214ENST00000496205 CCDC81Q6ZN84 652 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 ADAT2Q7Z6V5 191 aaKnown RBP5.78□□□□□ -1.48
CLK1-214ENST00000496205 DNERQ8NFT8 737 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 MBD6Q96DN6 1003 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 PCED1AQ9H1Q7 454 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 VPS11Q9H270 941 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 ZNF408Q9H9D4 720 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 MARCH2Q9P0N8 246 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 MRVI1Q9Y6F6 885 aa5.78□□□□□ -1.48
CLK1-214ENST00000496205 ETFBP38117 255 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 CRB2Q5IJ48 1285 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 ZNF585AQ6P3V2 769 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 DPH6Q7L8W6 267 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 DCP2Q8IU60 420 aaKnown RBP5.77□□□□□ -1.49
CLK1-214ENST00000496205 SEC16BQ96JE7 1060 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 WWC2-AS2Q96NR7 200 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 GPRC5CQ9NQ84 441 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 CLEC1BQ9P126 229 aa5.77□□□□□ -1.49
CLK1-214ENST00000496205 NPEPPSL1A6NEC2 478 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 ZNF28P17035 718 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 RBL2Q08999 1139 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 KLF10Q13118 480 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 ADAM9Q13443 819 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 TEX2Q8IWB9 1127 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 PALM2Q8IXS6 379 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 FAM169BQ8N8A8 192 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 SHDQ96IW2 340 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 PTPN18Q99952 460 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 GBP3Q9H0R5 595 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 PIF1Q9H611 641 aa5.76□□□□□ -1.49
CLK1-214ENST00000496205 ING1Q9UK53 422 aaPredicted RBP5.76□□□□□ -1.49
CLK1-214ENST00000496205 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 PPM1BO75688 479 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 PLS3P13797 630 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 GRB10Q13322 594 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 R3HDM1Q15032 1099 aaKnown RBP5.75□□□□□ -1.49
CLK1-214ENST00000496205 SURF1Q15526 300 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 INF2Q27J81 1249 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 ZC3H18Q86VM9 953 aaKnown RBP5.75□□□□□ -1.49
CLK1-214ENST00000496205 VPS37DQ86XT2 251 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 ZNF513Q8N8E2 541 aaPredicted RBP5.75□□□□□ -1.49
CLK1-214ENST00000496205 PMFBP1Q8TBY8 1022 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 IGDCC4Q8TDY8 1250 aa5.75□□□□□ -1.49
CLK1-214ENST00000496205 KLHL6Q8WZ60 621 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms