RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 TINF2Q9BSI4 451 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 CASP8AP2Q9UKL3 1982 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 LRRC37A2A6NM11 1700 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 HTTP42858 3142 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 CYP3A7-CYP3A51PA0A087WV96 503 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 CCNT1O60563 726 aaKnown RBP22.15■■□□□ 1.14
ATG3-208ENST00000495756 TDP2O95551 362 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 CYP3A7P24462 503 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 ZNF76P36508 570 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 IRF5Q13568 498 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 NBR1Q14596 966 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 OLFML2BQ68BL8 750 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 PPP4R3AQ6IN85 833 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 MOXD1Q6UVY6 613 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 ARMCX2Q7L311 632 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 ZFP91Q96JP5 570 aaPredicted RBP22.15■■□□□ 1.14
ATG3-208ENST00000495756 NAP1L4Q99733 375 aaKnown RBP22.15■■□□□ 1.14
ATG3-208ENST00000495756 FLRT1Q9NZU1 646 aa22.15■■□□□ 1.14
ATG3-208ENST00000495756 MCM3APO60318 1980 aa22.14■■□□□ 1.14
ATG3-208ENST00000495756 FAM86B1E9PN63 330 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 EIF3JO75822 258 aaKnown RBP22.14■■□□□ 1.13
ATG3-208ENST00000495756 STAM2O75886 525 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 FAM86B2P0C5J1 330 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 GCFC2P16383 781 aaKnown RBP22.14■■□□□ 1.13
ATG3-208ENST00000495756 CTCFP49711 727 aaPredicted RBP22.14■■□□□ 1.13
ATG3-208ENST00000495756 PRMT2P55345 433 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 CCL14Q16627 93 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 CEP55Q53EZ4 464 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 OTOP1Q7RTM1 612 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 CYP2W1Q8TAV3 490 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 PCDHB6Q9Y5E3 794 aa22.14■■□□□ 1.13
ATG3-208ENST00000495756 SYNGAP1Q96PV0 1343 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 IGHA2P01877 340 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 ITGB5P18084 799 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 DNM1Q05193 864 aaKnown RBP22.13■■□□□ 1.13
ATG3-208ENST00000495756 ZNF174Q15697 407 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 MBOAT7Q96N66 472 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 ZNF396Q96N95 335 aaPredicted RBP22.13■■□□□ 1.13
ATG3-208ENST00000495756 MXRA8Q9BRK3 442 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 RTEL1Q9NZ71 1219 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 TRIM17Q9Y577 477 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 UBIAD1Q9Y5Z9 338 aa22.13■■□□□ 1.13
ATG3-208ENST00000495756 IGLV3-22A0A075B6J6 115 aa22.12■■□□□ 1.13
ATG3-208ENST00000495756 MEIS1O00470 390 aa22.12■■□□□ 1.13
ATG3-208ENST00000495756 MCM7P33993 719 aa22.12■■□□□ 1.13
ATG3-208ENST00000495756 LBX1P52954 281 aa22.12■■□□□ 1.13
ATG3-208ENST00000495756 ORC2Q13416 577 aaPredicted RBP22.12■■□□□ 1.13
ATG3-208ENST00000495756 PRR16Q569H4 304 aa22.12■■□□□ 1.13
ATG3-208ENST00000495756 TNPO1Q92973 898 aaKnown RBP22.12■■□□□ 1.13
ATG3-208ENST00000495756 INPP4AQ96PE3 977 aaPredicted RBP22.12■■□□□ 1.13
ATG3-208ENST00000495756 USP28Q96RU2 1077 aa22.12■■□□□ 1.13
ATG3-208ENST00000495756 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.12■■□□□ 1.13
ATG3-208ENST00000495756 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.12■■□□□ 1.13
ATG3-208ENST00000495756 DDX25Q9UHL0 483 aaKnown RBP22.12■■□□□ 1.13
ATG3-208ENST00000495756 RGS20O76081 388 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 SNAI1O95863 264 aaPredicted RBP22.11■■□□□ 1.13
ATG3-208ENST00000495756 Q4G0T1 1027 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 ATL3Q6DD88 541 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 NIPA1Q7RTP0 329 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 TRMT44Q8IYL2 757 aaKnown RBP22.11■■□□□ 1.13
ATG3-208ENST00000495756 RAET1EQ8TD07 263 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 TRIB2Q92519 343 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 LENG9Q96B70 501 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 CHAMP1Q96JM3 812 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 FTOQ9C0B1 505 aaKnown RBP eCLIP22.11■■□□□ 1.13
ATG3-208ENST00000495756 JADE2Q9NQC1 790 aa22.11■■□□□ 1.13
ATG3-208ENST00000495756 TFIP11Q9UBB9 837 aaKnown RBP22.11■■□□□ 1.13
ATG3-208ENST00000495756 CENPFP49454 3210 aa22.1■■□□□ 1.13
ATG3-208ENST00000495756 SLC37A4O43826 429 aa22.1■■□□□ 1.13
ATG3-208ENST00000495756 GNPTABQ3T906 1256 aa22.1■■□□□ 1.13
ATG3-208ENST00000495756 ANO1Q5XXA6 986 aa22.1■■□□□ 1.13
ATG3-208ENST00000495756 EEPD1Q7L9B9 569 aa22.1■■□□□ 1.13
ATG3-208ENST00000495756 CLIC4Q9Y696 253 aa22.1■■□□□ 1.13
ATG3-208ENST00000495756 ADCY3O60266 1144 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 NEMFO60524 1076 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 CYP2C19P33261 490 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 SETQ01105 290 aaPredicted RBP22.09■■□□□ 1.13
ATG3-208ENST00000495756 CEBPZQ03701 1054 aaKnown RBP22.09■■□□□ 1.13
ATG3-208ENST00000495756 SF3A1Q15459 793 aaKnown RBP22.09■■□□□ 1.13
ATG3-208ENST00000495756 NLRX1Q86UT6 975 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 PLA2G4DQ86XP0 818 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 FBXO16Q8IX29 292 aaPredicted RBP22.09■■□□□ 1.13
ATG3-208ENST00000495756 GPRASP2Q96D09 838 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 WDR11Q9BZH6 1224 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 KATNBL1Q9H079 304 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 VTA1Q9NP79 307 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 POLR3EQ9NVU0 708 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 CFAP45Q9UL16 551 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 KIAA1217Q5T5P2 1943 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 MTMR1Q13613 665 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 POTEDQ86YR6 584 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 ABHD16BQ9H3Z7 469 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 KCNH7Q9NS40 1196 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 CNPY2Q9Y2B0 182 aa22.09■■□□□ 1.13
ATG3-208ENST00000495756 ARP10275 920 aa22.08■■□□□ 1.12
ATG3-208ENST00000495756 ELNP15502 786 aa22.08■■□□□ 1.12
ATG3-208ENST00000495756 NASPP49321 788 aaPredicted RBP22.08■■□□□ 1.12
ATG3-208ENST00000495756 KRT85P78386 507 aa22.08■■□□□ 1.12
ATG3-208ENST00000495756 PTGDRQ13258 359 aa22.08■■□□□ 1.12
ATG3-208ENST00000495756 MFSD14CQ5VZR4 134 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms