RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	IL31RA	Q8NI17	732 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	JAKMIP1	Q96N16	626 aa	Known RBP	12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	SEZ6L	Q9BYH1	1024 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	SEC63	Q9UGP8	760 aa	Known RBP	12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	DDX41	Q9UJV9	622 aa	Known RBP	12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	TBX21	Q9UL17	535 aa		12.65	□□□□□ -0.38
DCTN1-223	ENST00000495643	hCG_1642624	A0A1W2PR95	340 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	PIK3CD	O00329	1044 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	MEIS2	O14770	477 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	ZBTB43	O43298	467 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	GH1	P01241	217 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	MYL3	P08590	195 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	MYCL	P12524	364 aa	Predicted RBP	12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	RAG1	P15918	1043 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	RCAN1	P53805	252 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	USP17L6P	Q6QN14	398 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	FCHSD1	Q86WN1	690 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	FBXL16	Q8N461	479 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	USP26	Q9BXU7	913 aa		12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	RBM28	Q9NW13	759 aa	Known RBP	12.64	□□□□□ -0.39
DCTN1-223	ENST00000495643	CNTNAP5	Q8WYK1	1306 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	KLF18	A0A0U1RQI7	1052 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	KPNA6	O60684	536 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	TIMP1	P01033	207 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	RPS6KB1	P23443	525 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	CDC27	P30260	824 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	CCND2	P30279	289 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	MRPS9	P82933	396 aa	Known RBP	12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	RTN1	Q16799	776 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	BRDT	Q58F21	947 aa	Predicted RBP	12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	BLOC1S2	Q6QNY1	142 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643		Q6ZUG5	572 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	AFG1L	Q8WV93	481 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	EMID1	Q96A84	441 aa	Predicted RBP	12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	MTG1	Q9BT17	334 aa	Predicted RBP	12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	AGXT2	Q9BYV1	514 aa		12.63	□□□□□ -0.39
DCTN1-223	ENST00000495643	GOLGA8A	A7E2F4	631 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	GOLGA8B	A8MQT2	603 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	TLR3	O15455	904 aa	Known RBP	12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	B4GALT4	O60513	344 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	MMP3	P08254	477 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	TGFB3	P10600	412 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	EPHB4	P54760	987 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	SP2	Q02086	613 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	APOBR	Q0VD83	1088 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	SHH	Q15465	462 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	KCNV1	Q6PIU1	500 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	SMARCC2	Q8TAQ2	1214 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	CUL5	Q93034	780 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	LRCH3	Q96II8	777 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	ZFP91	Q96JP5	570 aa	Predicted RBP	12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	TRPV6	Q9H1D0	765 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	PSTPIP2	Q9H939	334 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	MRVI1	Q9Y6F6	885 aa		12.62	□□□□□ -0.39
DCTN1-223	ENST00000495643	NID2	Q14112	1375 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	STAM2	O75886	525 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	CAST	P20810	708 aa	Known RBP	12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	PSMA5	P28066	241 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	FGD1	P98174	961 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	FPGS	Q05932	587 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	LAMC2	Q13753	1193 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	NBPF20	Q3BBV1	942 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	C9orf50	Q5SZB4	431 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	MYSM1	Q5VVJ2	828 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	WWC2	Q6AWC2	1192 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	MFSD5	Q6N075	450 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	HEATR3	Q7Z4Q2	680 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	BRF1	Q92994	677 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	INPP4A	Q96PE3	977 aa	Predicted RBP	12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	ZSWIM6	Q9HCJ5	1215 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643		V9GY48	417 aa	Predicted RBP	12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	DOCK5	Q9H7D0	1870 aa		12.61	□□□□□ -0.39
DCTN1-223	ENST00000495643	SPATA31C2	B4DYI2	1134 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	HOXD8	P13378	290 aa	Predicted RBP	12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	ICAM3	P32942	547 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	ADD1	P35611	737 aa	Known RBP	12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	EVC	P57679	992 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	UBE2S	Q16763	222 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	CELF3	Q5SZQ8	465 aa	Known RBP	12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	PCNX4	Q63HM2	1172 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	TYW1B	Q6NUM6	668 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	GPR153	Q6NV75	609 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	XRRA1	Q6P2D8	792 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	NFRKB	Q6P4R8	1299 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	RUFY3	Q7L099	469 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	DHX37	Q8IY37	1157 aa	Known RBP	12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	PPTC7	Q8NI37	304 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	KAT2B	Q92831	832 aa		12.6	□□□□□ -0.39
DCTN1-223	ENST00000495643	STXBP3	O00186	592 aa		12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	GGPS1	O95749	300 aa		12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	UBA1	P22314	1058 aa	Known RBP	12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	CYP2C18	P33260	490 aa		12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	METAP2	P50579	478 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	PTPN11	Q06124	597 aa	Predicted RBP	12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	SEMA3F	Q13275	785 aa		12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	DGKD	Q16760	1214 aa		12.59	□□□□□ -0.39
DCTN1-223	ENST00000495643	GNPTAB	Q3T906	1256 aa		12.59	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms